RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 TM4SF5O14894 197 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 SLC22A2O15244 555 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 GSC2O15499 205 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 MAFKO60675 156 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 TRIM13O60858 407 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 CIB2O75838 187 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 RGS9O75916 674 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 PAPSS2O95340 614 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 CBX6O95503 412 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 ANP32DO95626 131 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 GSRP00390 522 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 SPATA31D3P0C874 917 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 FGF3P11487 239 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 HOXB8P17481 243 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 PTPN2P17706 415 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 ALAS2P22557 587 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 ADSLP30566 484 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 CD68P34810 354 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 PGM1P36871 562 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 TUBP50607 506 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 CLCN4P51793 760 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 RAP1GDS1P52306 607 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 ABCE1P61221 599 aaKnown RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 CRADDP78560 199 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 ZBTB17Q13105 803 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 SLC12A1Q13621 1099 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 THOC5Q13769 683 aaKnown RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 HNRNPDQ14103 355 aaKnown RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 SMAD2Q15796 467 aaKnown RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 AAK1Q2M2I8 961 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 HSP90AA5PQ58FG0 334 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 CFAP157Q5JU67 520 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 HECTD3Q5T447 861 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 KIAA0930Q6ICG6 404 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 FSTL4Q6MZW2 842 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 ANKRD54Q6NXT1 300 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 TMEM184AQ6ZMB5 413 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 SPATA31D4Q6ZUB0 917 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 CHSY3Q70JA7 882 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 NET1Q7Z628 596 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 GALNT7Q86SF2 657 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 SCD5Q86SK9 330 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 CLEC14AQ86T13 490 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 KMT2EQ8IZD2 1858 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 DCLK2Q8N568 766 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 CCDC33Q8N5R6 958 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 TEX9Q8N6V9 391 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 CNTD1Q8N815 330 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 LEMD2Q8NC56 503 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 OR6Y1Q8NGX8 325 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 ZSCAN18Q8TBC5 510 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 NUP210Q8TEM1 1887 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 AGAP11Q8TF27 550 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 PDCD6IPQ8WUM4 868 aaKnown RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 NSMCE1Q8WV22 266 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 PEX13Q92968 403 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 STMN2Q93045 179 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 FBXO32Q969P5 355 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 PPP2R3CQ969Q6 453 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 PSMG2Q969U7 264 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 UTP4Q969X6 686 aaKnown RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 CMTM5Q96DZ9 223 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 CCDC126Q96EE4 140 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 TSPAN17Q96FV3 270 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 FCRL3Q96P31 734 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 NUDCD1Q96RS6 583 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 RANBP9Q96S59 729 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 CDCA3Q99618 268 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 GPR22Q99680 433 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 SEPT5Q99719 369 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 DDX50Q9BQ39 737 aaKnown RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 GORASP1Q9BQQ3 440 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 MCMBPQ9BTE3 642 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 FSD1LQ9BXM9 530 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 CEP41Q9BYV8 373 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 SLC25A51Q9H1U9 297 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 S1PR5Q9H228 398 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 C12orf65Q9H3J6 166 aaKnown RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 SOX17Q9H6I2 414 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 YY1AP1Q9H869 796 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 NMRAL1Q9HBL8 299 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 TRPC7Q9HCX4 862 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 ANLNQ9NQW6 1124 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 TMEM30AQ9NV96 361 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 ARL8BQ9NVJ2 186 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.78□□□□□ -1.48
SDF2-206ENST00000587788 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 STOML1Q9UBI4 398 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 IPO11Q9UI26 975 aaKnown RBP5.78□□□□□ -1.48
SDF2-206ENST00000587788 CD207Q9UJ71 328 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 MCM8Q9UJA3 840 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 EMCNQ9ULC0 261 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 C15orf41Q9Y2V0 281 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 MYO16Q9Y6X6 1858 aa5.78□□□□□ -1.48
SDF2-206ENST00000587788 A0A1W2PQH9 124 aa5.77□□□□□ -1.49
SDF2-206ENST00000587788 HEATR9A2RTY3 570 aa5.77□□□□□ -1.49
SDF2-206ENST00000587788 ZNF840PA6NDX5 716 aa5.77□□□□□ -1.49
SDF2-206ENST00000587788 B2RBV5 119 aa5.77□□□□□ -1.49
SDF2-206ENST00000587788 SHISA8B8ZZ34 492 aa5.77□□□□□ -1.49
SDF2-206ENST00000587788 E9PAM4 449 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms