RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 CCDC13Q8IYE1 715 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 NRSN1Q8IZ57 195 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 PGBD5Q8N414 524 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 CCHCR1Q8TD31 782 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 OR1E3Q8WZA6 343 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 MAML1Q92585 1016 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 FAF2Q96CS3 445 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 HDAC11Q96DB2 347 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 ATXN7L3BQ96GX2 97 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 HIC2Q96JB3 615 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 SLC46A1Q96NT5 459 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 ADGRE3Q9BY15 652 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 BRD8Q9H0E9 1235 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 LRRN3Q9H3W5 708 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 PRORYQ9H606 182 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 STN1Q9H668 368 aaKnown RBP11.24□□□□□ -0.61
ACTN4-209ENST00000586538 RBM22Q9NW64 420 aaKnown RBP eCLIP11.24□□□□□ -0.61
ACTN4-209ENST00000586538 PNMA8BQ9ULN7 279 aaPredicted RBP11.24□□□□□ -0.61
ACTN4-209ENST00000586538 CELSR3Q9NYQ7 3312 aa11.24□□□□□ -0.61
ACTN4-209ENST00000586538 SHROOM3Q8TF72 1996 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 A0A0J9YYE9 177 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 NPIPB15A6NHN6 443 aaPredicted RBP11.23□□□□□ -0.61
ACTN4-209ENST00000586538 A8MX80 341 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 B4DGG1 531 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 PLD2O14939 933 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 PPP1R12AO14974 1030 aaPredicted RBP11.23□□□□□ -0.61
ACTN4-209ENST00000586538 TRBC1P01850 177 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 IVLP07476 585 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 JMJD7P0C870 316 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 ITPKBP27987 946 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 ETV3P41162 512 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 SLC1A1P43005 524 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 TNNT3P45378 269 aaPredicted RBP11.23□□□□□ -0.61
ACTN4-209ENST00000586538 ARSEP51690 589 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 CXADRP78310 365 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 LRRC66Q68CR7 880 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 TXNRD3NBQ6F5E7 133 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 ADAMTSL4Q6UY14 1074 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 CLEC14AQ86T13 490 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 TP53INP2Q8IXH6 220 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 CCNYQ8ND76 341 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 EXD1Q8NHP7 514 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 GPBAR1Q8TDU6 330 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 PIH1D2Q8WWB5 315 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 AP2M1Q96CW1 435 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 SRPK1Q96SB4 655 aaKnown RBP11.23□□□□□ -0.61
ACTN4-209ENST00000586538 CMKLR1Q99788 373 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 DPYSL5Q9BPU6 564 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 TDRD1Q9BXT4 1180 aaKnown RBP11.23□□□□□ -0.61
ACTN4-209ENST00000586538 TMEM168Q9H0V1 697 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 TSPY26PQ9H489 355 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 EPB41L5Q9HCM4 733 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 LUC7LQ9NQ29 371 aaKnown RBP11.23□□□□□ -0.61
ACTN4-209ENST00000586538 ASCL3Q9NQ33 180 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 RAD18Q9NS91 495 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 ABHD10Q9NUJ1 306 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 DDX56Q9NY93 547 aaKnown RBP11.23□□□□□ -0.61
ACTN4-209ENST00000586538 PKD2L2Q9NZM6 624 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 LRIT1Q9P2V4 623 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 INTUQ9ULD6 942 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 PCDHGA7Q9Y5G6 932 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 ZFYVE26Q68DK2 2539 aa11.23□□□□□ -0.61
ACTN4-209ENST00000586538 LRRD1A4D1F6 860 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 RGSL1A5PLK6 1076 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 RHPN2P1A8MT19 583 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 CDRT15L2A8MXV6 281 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 ERVH48-1M5A8F1 160 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 FZD6O60353 706 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 TNFSF15O95150 251 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 CELA2BP08218 269 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-209ENST00000586538 CD48P09326 243 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 SLC2A4P14672 509 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 GM2AP17900 193 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 LHCGRP22888 699 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 IL4RP24394 825 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 GPR3P46089 330 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 GNPDA1P46926 289 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 MMRN1Q13201 1228 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 HLTFQ14527 1009 aaKnown RBP eCLIP11.22□□□□□ -0.61
ACTN4-209ENST00000586538 PDK1Q15118 436 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 MAP9Q49MG5 647 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 SOWAHCQ53LP3 525 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-209ENST00000586538 TMEM164Q5U3C3 297 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 LRRC38Q5VT99 294 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 FOXR1Q6PIV2 292 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 Q6ZVL8 140 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 RAB11FIP2Q7L804 512 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 VSTM4Q8IW00 320 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 CBARPQ8N350 705 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-209ENST00000586538 FBXO39Q8N4B4 442 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 AVL9Q8NBF6 648 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 ZDHHC1Q8WTX9 485 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 LYSMD1Q96S90 227 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 FRMD8Q9BZ67 464 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-209ENST00000586538 PCDH9Q9HC56 1237 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 MRPL40Q9NQ50 206 aaKnown RBP11.22□□□□□ -0.61
ACTN4-209ENST00000586538 SEPT10Q9P0V9 454 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 SUFUQ9UMX1 484 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 NENFQ9UMX5 172 aa11.22□□□□□ -0.61
ACTN4-209ENST00000586538 SLC17A4Q9Y2C5 497 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms