RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 STYXQ8WUJ0 223 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 PTCD2Q8WV60 388 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 SLC39A13Q96H72 371 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 TMEM175Q9BSA9 504 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 VCXQ9H320 206 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 VCX3BQ9H321 246 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 ELAC1Q9H777 363 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 CIDEBQ9UHD4 219 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 INSL5Q9Y5Q6 135 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 SLCO1B7G3V0H7 640 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 FFAR3O14843 346 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 GPR42O15529 346 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 TLL1O43897 1013 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 IGSF6O95976 241 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 GNRH1P01148 92 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 RBBP5Q15291 538 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 TRMT5Q32P41 509 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 ARHGAP15Q53QZ3 475 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 CNKSR3Q6P9H4 555 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 NAF1Q96HR8 494 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 TCF25Q9BQ70 676 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 C1orf50Q9BV19 199 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 MTRRQ9UBK8 725 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 CD84Q9UIB8 345 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 SCN4AP35499 1836 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 PITPNM1O00562 1244 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 ADH1AP07327 375 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 ZCCHC18P0CG32 403 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 CDKN1CP49918 316 aaPredicted RBP12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 AARS2Q5JTZ9 985 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 IZUMO2Q6UXV1 221 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 CILP2Q8IUL8 1156 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 STAG3L4Q8TBR4 150 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 ABCB8Q9NUT2 735 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 A8MT66 165 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 TMEM189-UBE2V1I3L0A0 370 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 KPNA3O00505 521 aaPredicted RBP12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 GLUD1P00367 558 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 KLKB1P03952 638 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 PKMP14618 531 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 SGSHP51688 502 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 PFKPQ01813 784 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 KIAA0408Q6ZU52 694 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 LYSMD3Q7Z3D4 306 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 METTL6Q8TCB7 284 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 ANKRD49Q8WVL7 239 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 MTFMTQ96DP5 389 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 MYO19Q96H55 970 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 FEM1CQ96JP0 617 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 VTI1BQ9UEU0 232 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 SPO11Q9Y5K1 396 aa12.44□□□□□ -0.42
SMARCA4-208ENST00000585799 TET1Q8NFU7 2136 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 PSMD12O00232 456 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 OR1I1O60431 355 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 ZNF7P17097 686 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 ST8SIA6P61647 398 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 SLC34A1Q06495 639 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 KRT72Q14CN4 511 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 DENND5AQ6IQ26 1287 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 KDELC1Q6UW63 502 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 LRRC74BQ6ZQY2 392 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 MYO1HQ8N1T3 1032 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 ZNF784Q8NCA9 323 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 C2CD4AQ8NCU7 369 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 MYLIPQ8WY64 445 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 WBP2Q969T9 261 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 UTP4Q969X6 686 aaKnown RBP12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 HECAQ9UBI9 543 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 SLC25A13Q9UJS0 675 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 PER2O15055 1255 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 FGF18O76093 207 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 LUC7L3O95232 432 aaKnown RBP12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 SERPINA4P29622 427 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 CDKN2DP55273 166 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 PRMT2P55345 433 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 NR6A1Q15406 480 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 MAPRE2Q15555 327 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 CYS1Q717R9 158 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 PGBD5Q8N414 524 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 IGFLR1Q9H665 355 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 WDR41Q9HAD4 459 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 ZNHIT2Q9UHR6 403 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 VPS9D1Q9Y2B5 631 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 AK5Q9Y6K8 562 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 STX16-NPEPL1H3BU86 382 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 CDC7O00311 574 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 MRASO14807 208 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 RFPL2O75678 378 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 STK19P49842 368 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 ECT2LQ008S8 904 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 ZNF33AQ06730 810 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 STX5Q13190 355 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 DNAJC14Q6Y2X3 702 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 FRMD7Q6ZUT3 714 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 CENPLQ8N0S6 344 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 RDH11Q8TC12 318 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 C2orf15Q8WU43 125 aaKnown RBP12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 PLD4Q96BZ4 506 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 GBP5Q96PP8 586 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms