RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 TTC7AQ9ULT0 858 aaPredicted RBP8.65□□□□□ -1.02
ATG4D-202ENST00000585437 RPL26L1Q9UNX3 145 aaKnown RBP8.65□□□□□ -1.02
ATG4D-202ENST00000585437 EFR3BQ9Y2G0 817 aa8.65□□□□□ -1.02
ATG4D-202ENST00000585437 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.65□□□□□ -1.02
ATG4D-202ENST00000585437 PCDHGA1Q9Y5H4 931 aa8.65□□□□□ -1.02
ATG4D-202ENST00000585437 PCDHA3Q9Y5H8 950 aa8.65□□□□□ -1.02
ATG4D-202ENST00000585437 RAI2Q9Y5P3 530 aa8.65□□□□□ -1.02
ATG4D-202ENST00000585437 CSNK1G3Q9Y6M4 447 aa8.65□□□□□ -1.02
ATG4D-202ENST00000585437 GOLGA4Q13439 2230 aaKnown RBP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 DMXL2Q8TDJ6 3036 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 LY6G6EA0A0G2JKS1 128 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 CCDC66A2RUB6 948 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 H3BM21 787 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 TRIM38O00635 465 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 SCAMP1O15126 338 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 CST8O60676 142 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 LDOC1O95751 146 aaPredicted RBP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 JCHAINP01591 159 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 HOXC4P09017 264 aaPredicted RBP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 ALPIP09923 528 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 CYP2A6P11509 494 aaPredicted RBP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 ZNF30P17039 623 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 ACP1P24666 158 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 NFKBIAP25963 317 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 TEAD1P28347 426 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 CXCR5P32302 372 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 THOP1P52888 689 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 COPS2P61201 443 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 SKOR1P84550 965 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 ZNF211Q13398 564 aaPredicted RBP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 PTK2BQ14289 1009 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 INPP5AQ14642 412 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 NFATC4Q14934 902 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 BEND6Q5SZJ8 279 aaPredicted RBP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 USP45Q70EL2 814 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 HSD11B1LQ7Z5J1 315 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 TECPR1Q7Z6L1 1165 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 TSPAN33Q86UF1 283 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 IFT20Q8IY31 132 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 PHACTR4Q8IZ21 702 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 RCOR2Q8IZ40 523 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 RBFAQ8N0V3 343 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 PELI3Q8N2H9 469 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 RASGEF1CQ8N431 466 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 EID2Q8N6I1 236 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 EIF1ADQ8N9N8 165 aaKnown RBP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 FAM181AQ8N9Y4 354 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 CCNYQ8ND76 341 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 PDCD6IPQ8WUM4 868 aaKnown RBP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 BTN2A2Q8WVV5 523 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 ALG3Q92685 438 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 IMP4Q96G21 291 aaKnown RBP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 CNDP2Q96KP4 475 aaKnown RBP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 CNTNAP3BQ96NU0 1288 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 QKIQ96PU8 341 aaKnown RBP eCLIP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 TRIB3Q96RU7 358 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 APOOQ9BUR5 198 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 LRRC61Q9BV99 259 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 CNTNAP3Q9BZ76 1288 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 VIPAS39Q9H9C1 493 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 KCTD5Q9NXV2 234 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 SAE1Q9UBE0 346 aaPredicted RBP8.64□□□□□ -1.03
ATG4D-202ENST00000585437 KLK13Q9UKR3 277 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 MSRB2Q9Y3D2 182 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 U3KQA8 63 aa8.64□□□□□ -1.03
ATG4D-202ENST00000585437 RP1P56715 2156 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 IGF2RP11717 2491 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 APOC4-APOC2K7ER74 178 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 K7ESM1 405 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 MAP2K7O14733 419 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 TPP1O14773 563 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 AQP9O43315 295 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 SIGLEC6O43699 453 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 LZTS3O60299 673 aaPredicted RBP8.63□□□□□ -1.03
ATG4D-202ENST00000585437 CEP104O60308 925 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 SEC31AO94979 1220 aaKnown RBP8.63□□□□□ -1.03
ATG4D-202ENST00000585437 SOD1P00441 154 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 APOC2P02655 101 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 PCCBP05166 539 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 C1SP09871 688 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 CKMT1AP12532 417 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 TSHRP16473 764 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 JUNDP17535 347 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 CKMT2P17540 419 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 SPINK2P20155 84 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 CA4P22748 312 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 PTPN3P26045 913 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 HNF1BP35680 557 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 DYNLT1P63172 113 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 GABPB1Q06547 395 aaPredicted RBP8.63□□□□□ -1.03
ATG4D-202ENST00000585437 DPTQ07507 201 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 ITKQ08881 620 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 AP1B1Q10567 949 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 WASHC5Q12768 1159 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 DNAJC3Q13217 504 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 ILKQ13418 452 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 NOMO1Q15155 1222 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 PTPRRQ15256 657 aa8.63□□□□□ -1.03
ATG4D-202ENST00000585437 SMAD1Q15797 465 aaKnown RBP8.63□□□□□ -1.03
ATG4D-202ENST00000585437 CDKN3Q16667 212 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms