RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 KIF19Q2TAC6 998 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TEX26Q8N6G2 289 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TFAP2CQ92754 450 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 RMND5BQ96G75 393 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SLC39A13Q96H72 371 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 LRCH3Q96II8 777 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TCF12Q99081 682 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CAAP1Q9H8G2 361 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 UXTQ9UBK9 157 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 KCTD3Q9Y597 815 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 DOCK4Q8N1I0 1966 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 LOC285095A0A1B0GVY8 99 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 AQP12BA6NM10 295 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PPP6CO00743 305 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 GPR182O15218 404 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ATXN1LP0C7T5 689 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ATP6V0D1P61421 351 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TIAL1Q01085 375 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ACVR1Q04771 509 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TNK2Q07912 1038 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ILF2Q12905 390 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PRMT9Q6P2P2 845 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ZNF549Q6P9A3 640 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PHYKPLQ8IUZ5 450 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 AQP12AQ8IXF9 295 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MINDY1Q8N5J2 469 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PTGR2Q8N8N7 351 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ARRDC2Q8TBH0 407 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 HM13Q8TCT9 377 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 GRIN3AQ8TCU5 1115 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PSMG2Q969U7 264 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ZYG11BQ9C0D3 744 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SP110Q9HB58 689 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TMEM248Q9NWD8 314 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 RSL24D1Q9UHA3 163 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CPA4Q9UI42 421 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TRPM7Q96QT4 1865 aa14.19□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TTC24A2A3L6 582 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PLOD2O00469 737 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 NR5A2O00482 541 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SIX3O95343 332 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ITGB1P05556 798 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SLC2A3P11169 496 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CDK4P11802 303 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MTHFD2P13995 350 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 HSD17B1P14061 328 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 NELFEP18615 380 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ALFQ53S48 1182 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SLC15A3Q8IY34 581 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MIER2Q8N344 545 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PACRGLQ8N7B6 248 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 FAM110BQ8TC76 370 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TWIST2Q8WVJ9 160 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TBATAQ96M53 351 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MID1IP1Q9NPA3 183 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PTGDR2Q9Y5Y4 395 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MYO16Q9Y6X6 1858 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 FXYD1O00168 92 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 AZIN1O14977 448 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PIP5K1BO14986 540 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 HNRNPRO43390 633 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CNTN5O94779 1100 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SLC4A1P02730 911 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ZNF37AP17032 561 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 HOXB8P17481 243 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CAPN3P20807 821 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PAX3P23760 479 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CDK9P50750 372 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SUOXP51687 545 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 FOXA1P55317 472 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TUSC3Q13454 348 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 VPS26BQ4G0F5 336 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 INTS11Q5TA45 600 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 KANK2Q63ZY3 851 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PGBD5Q8N414 524 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 FIBCD1Q8N539 461 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MFSD2AQ8NA29 543 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 RHEBL1Q8TAI7 183 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 EXT2Q93063 718 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TMIGD2Q96BF3 282 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SUSD3Q96L08 255 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CLK4Q9HAZ1 481 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SLC8A2Q9UPR5 921 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CENPFP49454 3210 aa14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TDRD15B5MCY1 1934 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MYADML2A6NDP7 307 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ANGPT2O15123 496 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MGEA5O60502 916 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MATN4O95460 622 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 GLP2RO95838 553 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 NME5P56597 212 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 HPCAP84074 193 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 GRB7Q14451 532 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 OR4D1Q15615 310 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MS4A13Q5J8X5 152 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MSANTD2Q6P1R3 559 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 RAB44Q7Z6P3 723 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MON1AQ86VX9 555 aa14.17□□□□□ -0.14
CDK5RAP3-237ENST00000585163 RYBPQ8N488 228 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms