RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 GRB14Q14449 540 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 MED22Q15528 200 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 TRIP6Q15654 476 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 LRRC26Q2I0M4 334 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 TMEM196Q5HYL7 178 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 MORN5Q5VZ52 161 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 CES5AQ6NT32 575 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 PPP1R2P3Q6NXS1 205 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 BLOC1S2Q6QNY1 142 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 ZSCAN30Q86W11 494 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 NUP93Q8N1F7 819 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 CFAP52Q8N1V2 620 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 OR6J1Q8NGC5 347 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 SPATA3Q8NHX4 192 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 MAML1Q92585 1016 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 ARRDC3Q96B67 414 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 SARAFQ96BY9 339 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 MARS2Q96GW9 593 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 AK8Q96MA6 479 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 FAM20AQ96MK3 541 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 CMTM3Q96MX0 182 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 SPAG5Q96R06 1193 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 FTHL17Q9BXU8 183 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 VPS16Q9H269 839 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 ZSCAN16Q9H4T2 348 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 SMURF2Q9HAU4 748 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 KLC4Q9NSK0 619 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 ARL8BQ9NVJ2 186 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 PPP1R14DQ9NXH3 145 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 MTMR4Q9NYA4 1195 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 UBE2J1Q9Y385 318 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 KDM3AQ9Y4C1 1321 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 HTTP42858 3142 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 PKD1L2Q7Z442 2459 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 TANC1Q9C0D5 1861 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 GRID2IPA4D2P6 1211 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 C16orf96A6NNT2 1141 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 INO80B-WBP1J3KQ70 363 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 SNAP23O00161 211 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 CD3EAPO15446 510 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 CRCPO75575 148 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 BCAR3O75815 825 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 RPP40O75818 363 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 TUBB4AP04350 444 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 RB1P06400 928 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 ABCB1P08183 1280 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC6A2P23975 617 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 HSPA4P34932 840 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 MLH1P40692 756 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 PIP4K2AP48426 406 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 VPS41P49754 854 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 NR1H2P55055 460 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 HSD11B2P80365 405 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 CREB5Q02930 508 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 PPARDQ03181 441 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 TRAF2Q12933 501 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 MYO1EQ12965 1108 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 PPIGQ13427 754 aaKnown RBP eCLIP1.98□□□□□ -2.097e-7■■■□□ 19
SMCHD1-211ENST00000584897 FHL3Q13643 280 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 FAM171A1Q5VUB5 890 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 DGAT2L7PQ6IED9 249 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 TAF2Q6P1X5 1199 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 KLHL35Q6PF15 583 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 PSRC1Q6PGN9 363 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 SERPINA13PQ6UXR4 307 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 GET4Q7L5D6 327 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 TRABD2AQ86V40 505 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 MICU3Q86XE3 530 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 DNAAF5Q86Y56 855 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 CEP57L1Q8IYX8 460 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 ADPRHL1Q8NDY3 354 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 TMIEQ8NEW7 156 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 ABHD11Q8NFV4 315 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 PSMA8Q8TAA3 256 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 RAET1EQ8TD07 263 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC22A17Q8WUG5 538 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 HDAC7Q8WUI4 952 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 TCP11Q8WWU5 503 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 TAF4BQ92750 862 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 SNX21Q969T3 373 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 PRMT6Q96LA8 375 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 RIT2Q99578 217 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 GHITMQ9H3K2 345 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 LPAR3Q9UBY5 353 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 DAPP1Q9UN19 280 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 OSGIN2Q9Y236 505 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 PCDHB2Q9Y5E7 798 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 HEMK1Q9Y5R4 338 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 UBE4BO95155 1302 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 UNC80Q8N2C7 3258 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 BTBD19C9JJ37 291 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 INSIG1O15503 277 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 CHRM5P08912 532 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 NPSP0C0P6 89 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 POLR2MP0CAP2 368 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 T-ENOLP0DO92 83 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 FDPSP14324 419 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 CHMLP26374 656 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 PRPHP41219 470 aa1.98□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC1A4P43007 532 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms