RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 ITGB7P26010 798 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 CCKBRP32239 447 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 UGT1A3P35503 534 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 RAD23BP54727 409 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 ADKP55263 362 aaKnown RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 GFRA1P56159 465 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 HNRNPKP61978 463 aaKnown RBP eCLIP6.3□□□□□ -1.4
CTC1-212ENST00000584439 GUCY1A3Q02108 690 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 BTKQ06187 659 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 ZFP36L1Q07352 338 aaKnown RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 CDC20Q12834 499 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 EIF2B5Q13144 721 aaKnown RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 EIF3IQ13347 325 aaKnown RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 FGL2Q14314 439 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 E2F5Q15329 346 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 ARHGAP44Q17R89 818 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 SETMARQ53H47 684 aaPredicted RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 RAB41Q5JT25 222 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 SEL1L3Q68CR1 1132 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 SP5Q6BEB4 398 aaPredicted RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 ASB18Q6ZVZ8 466 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 TIPARPQ7Z3E1 657 aaKnown RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 PTAR1Q7Z6K3 402 aaPredicted RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 ABI3BPQ7Z7G0 1075 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 OR2C3Q8N628 320 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 IL22RA1Q8N6P7 574 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 KYQ8NBH2 561 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 FAM13CQ8NE31 585 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 ADCY4Q8NFM4 1077 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 NDRG1Q92597 394 aaKnown RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 SLC35C1Q96A29 364 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 KIAA1191Q96A73 305 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 TBC1D20Q96BZ9 403 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 CYFIP2Q96F07 1278 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 LURAP1Q96LR2 239 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 ZSWIM1Q9BR11 485 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 CPEB1Q9BZB8 566 aaKnown RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 STRADBQ9C0K7 418 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 SCAND2PQ9GZW5 306 aaPredicted RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 SEMA6CQ9H3T2 930 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 FBXO44Q9H4M3 255 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 CYP3A43Q9HB55 503 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 SMYD2Q9NRG4 433 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 PDP2Q9P2J9 529 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 COQ4Q9Y3A0 265 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 EMC9Q9Y3B6 208 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 ZNF451Q9Y4E5 1061 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 MRPS18BQ9Y676 258 aaKnown RBP6.3□□□□□ -1.4
CTC1-212ENST00000584439 POLEQ07864 2286 aa6.3□□□□□ -1.4
CTC1-212ENST00000584439 ATP8B3O60423 1300 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 FBN1P35555 2871 aaKnown RBP6.29□□□□□ -1.4
CTC1-212ENST00000584439 PIKFYVEQ9Y2I7 2098 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 SPTY2D1-AS1A0A0U1RR47 76 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 LOC101059948A0A1B0GTJ6 334 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 EDDM13A0A1B0GTR0 161 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 TARSL2A2RTX5 802 aaKnown RBP6.29□□□□□ -1.4
CTC1-212ENST00000584439 PRAMEF27A3QJZ7 478 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 STMND1H3BQB6 276 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 YY2O15391 372 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 PPM1BO75688 479 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 CNTN5O94779 1100 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 UBOX5O94941 541 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 KCNH1O95259 989 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 CALCAP01258 141 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 FAM200BP0CF97 657 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 TIMP2P16035 220 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 PSMC2P35998 433 aaKnown RBP6.29□□□□□ -1.4
CTC1-212ENST00000584439 GPR3P46089 330 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 STT3AP46977 705 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 PRIM2P49643 509 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 MXI1P50539 228 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 COG7P83436 770 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 OCRLQ01968 901 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 MAP4K2Q12851 820 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 TAF11Q15544 211 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 PRSS53Q2L4Q9 553 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 ZXDCQ2QGD7 858 aaPredicted RBP6.29□□□□□ -1.4
CTC1-212ENST00000584439 ARHGAP17Q68EM7 881 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 KRT39Q6A163 491 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 ANKRD40Q6AI12 368 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 FAAH2Q6GMR7 532 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 CCDC186Q7Z3E2 898 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 TMEM135Q86UB9 458 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 TP53INP2Q8IXH6 220 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 PHACTR4Q8IZ21 702 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 APCDD1Q8J025 514 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 SLC34A3Q8N130 599 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 MEIOBQ8N635 442 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 Q8N9G6 341 aaPredicted RBP6.29□□□□□ -1.4
CTC1-212ENST00000584439 RCBTB1Q8NDN9 531 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 FBXL13Q8NEE6 735 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 LMO3Q8TAP4 145 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 APOBEC4Q8WW27 367 aaKnown RBP6.29□□□□□ -1.4
CTC1-212ENST00000584439 JADE3Q92613 823 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 C19orf60Q96EN9 201 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 RNF31Q96EP0 1072 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 TMA16Q96EY4 203 aaKnown RBP6.29□□□□□ -1.4
CTC1-212ENST00000584439 UBXN10Q96LJ8 280 aa6.29□□□□□ -1.4
CTC1-212ENST00000584439 HEXIM2Q96MH2 286 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms