RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TSEN2Q8NCE0 465 aaKnown RBP15.71■□□□□ 0.11
SKA2-209ENST00000583976 GRAMD1AQ96CP6 724 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 LIN37Q96GY3 246 aaPredicted RBP15.71■□□□□ 0.11
SKA2-209ENST00000583976 NSMCE3Q96MG7 304 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 APOOQ9BUR5 198 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 SUV39H2Q9H5I1 410 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 ETNK2Q9NVF9 386 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 ATXN7L1Q9ULK2 861 aaPredicted RBP15.71■□□□□ 0.11
SKA2-209ENST00000583976 TMEM202A6NGA9 273 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 B4DGG1 531 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 J3QKU1 62 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 PRAMEF11O60813 436 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 ALPIP09923 528 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 GM2AP17900 193 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 ITIH1P19827 911 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 UGT1A5P35504 534 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 MARCKSL1P49006 195 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 PEX5P50542 639 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 ANKRD20A8PQ5CZ79 823 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 JAMLQ86YT9 394 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 TP53INP2Q8IXH6 220 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 LRRC57Q8N9N7 239 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 CCL4L1Q8NHW4 92 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 FAM71BQ8TC56 605 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 KRT35Q92764 455 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 WDR92Q96MX6 357 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 GFM1Q96RP9 751 aaKnown RBP15.7■□□□□ 0.1
SKA2-209ENST00000583976 RBM15Q96T37 977 aaKnown RBP eCLIP15.7■□□□□ 0.1
SKA2-209ENST00000583976 SLC39A8Q9C0K1 460 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 DDX56Q9NY93 547 aaKnown RBP15.7■□□□□ 0.1
SKA2-209ENST00000583976 PISDQ9UG56 409 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 CAPN6Q9Y6Q1 641 aa15.7■□□□□ 0.1
SKA2-209ENST00000583976 DFFAO00273 331 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 TOR1BO14657 336 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 EFSO43281 561 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 PSTPIP1O43586 416 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 FTCDO95954 541 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 HTR1BP28222 390 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 SLC5A2P31639 672 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 PAPOLAP51003 745 aaKnown RBP15.69■□□□□ 0.1
SKA2-209ENST00000583976 BLKP51451 505 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 INHBCP55103 352 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 MTM1Q13496 603 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 LLGL1Q15334 1064 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 ERAP2Q6P179 960 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 TMCO3Q6UWJ1 677 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 CCDC81Q6ZN84 652 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 RAB11FIP2Q7L804 512 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 TMPRSS9Q7Z410 1059 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 PEX26Q7Z412 305 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 CCNJLQ8IV13 435 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 ARHGAP12Q8IWW6 846 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 FBXO39Q8N4B4 442 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 RNF10Q8N5U6 811 aaKnown RBP15.69■□□□□ 0.1
SKA2-209ENST00000583976 Q8N9G6 341 aaPredicted RBP15.69■□□□□ 0.1
SKA2-209ENST00000583976 WDR48Q8TAF3 677 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 ZNF670Q9BS34 389 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 SUDS3Q9H7L9 328 aaPredicted RBP15.69■□□□□ 0.1
SKA2-209ENST00000583976 DONSONQ9NYP3 566 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 RCOR3Q9P2K3 495 aaPredicted RBP15.69■□□□□ 0.1
SKA2-209ENST00000583976 AMFRQ9UKV5 643 aa15.69■□□□□ 0.1
SKA2-209ENST00000583976 PACSIN2Q9UNF0 486 aaPredicted RBP15.69■□□□□ 0.1
SKA2-209ENST00000583976 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
SKA2-209ENST00000583976 TTC24A2A3L6 582 aaPredicted RBP15.68■□□□□ 0.1
SKA2-209ENST00000583976 C3orf70A6NLC5 250 aaPredicted RBP15.68■□□□□ 0.1
SKA2-209ENST00000583976 A8MX80 341 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 NOBOXO60393 691 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 RECQL5O94762 991 aaPredicted RBP15.68■□□□□ 0.1
SKA2-209ENST00000583976 ETV5P41161 510 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 SUOXP51687 545 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 NDST2P52849 883 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 BRAT1Q6PJG6 821 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 MFSD7Q6UXD7 560 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 NT5DC3Q86UY8 548 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 GKN2Q86XP6 184 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 SYCE1Q8N0S2 351 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 GPR156Q8NFN8 814 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 CCDC97Q96F63 343 aaPredicted RBP15.68■□□□□ 0.1
SKA2-209ENST00000583976 WBP1Q96G27 269 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 LGR4Q9BXB1 951 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 MAK16Q9BXY0 300 aaKnown RBP15.68■□□□□ 0.1
SKA2-209ENST00000583976 TMEM168Q9H0V1 697 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 LRRN3Q9H3W5 708 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.68■□□□□ 0.1
SKA2-209ENST00000583976 LOXL2Q9Y4K0 774 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 RNF215Q9Y6U7 377 aa15.68■□□□□ 0.1
SKA2-209ENST00000583976 ARHGAP42A6NI28 874 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 SERPINA4P29622 427 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 CCKBRP32239 447 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 CTNNA1P35221 906 aaKnown RBP15.67■□□□□ 0.1
SKA2-209ENST00000583976 MLLT3P42568 568 aaPredicted RBP15.67■□□□□ 0.1
SKA2-209ENST00000583976 KIAA1024LP59773 190 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 AGERQ15109 404 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 CERCAMQ5T4B2 595 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 AFMIDQ63HM1 303 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 KAZNQ674X7 775 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 LVRNQ6Q4G3 990 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 ZNF662Q6ZS27 426 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 SPRED1Q7Z699 444 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 SRLQ86TD4 932 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms