RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 TFAP2DQ7Z6R9 452 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 BIVMQ86UB2 503 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 SFRP1Q8N474 314 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 PDILTQ8N807 584 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 PLA2G15Q8NCC3 412 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 OR7D4Q8NG98 312 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 ADAMTS17Q8TE56 1095 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 SLC37A2Q8TED4 501 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 STK32AQ8WU08 396 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 CASKIN2Q8WXE0 1202 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 ARHGEF2Q92974 986 aaKnown RBP6.33□□□□□ -1.4
NUP85-221ENST00000583548 C9orf72Q96LT7 481 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 IP6K3Q96PC2 410 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 TRAPPC9Q96Q05 1148 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 FOXC2Q99958 501 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 C7orf25Q9BPX7 421 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 CXXC4Q9H2H0 198 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 SARS2Q9NP81 518 aaKnown RBP6.33□□□□□ -1.4
NUP85-221ENST00000583548 KLHL3Q9UH77 587 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 NEU2Q9Y3R4 380 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 MFHAS1Q9Y4C4 1052 aa6.33□□□□□ -1.4
NUP85-221ENST00000583548 AKAP9Q99996 3911 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 SYNJ2BP-COX16A0A087WUM0 186 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 RECQL5O94762 991 aaPredicted RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 C9P02748 559 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 KLK3P07288 261 aaPredicted RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 IVLP07476 585 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 PDIA4P13667 645 aaKnown RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 RPL13P26373 211 aaKnown RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 PSMC2P35998 433 aaKnown RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 MMP12P39900 470 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 ADCY8P40145 1251 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 TSFMP43897 325 aaKnown RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 MAPK9P45984 424 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 SMSP52788 366 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 RPS18P62269 152 aaKnown RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 LRP8Q14114 963 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 MYBPC3Q14896 1274 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 MEA1Q16626 185 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 SKOR2Q2VWA4 1001 aaPredicted RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 B3GNTL1Q67FW5 361 aaPredicted RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 BRAT1Q6PJG6 821 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 FAM180AQ6UWF9 173 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 ZNF765Q7L2R6 523 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 RAB43Q86YS6 212 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 CBARPQ8N350 705 aaPredicted RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 IQUBQ8NA54 791 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 CLEC1AQ8NC01 280 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 GRHL3Q8TE85 626 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 MTFMTQ96DP5 389 aaKnown RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 CCDC120Q96HB5 630 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 C1orf74Q96LT6 269 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 FER1L6-AS2Q96M78 137 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 CLIC6Q96NY7 704 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 NCAPGQ9BPX3 1015 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 WDR77Q9BQA1 342 aaPredicted RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 TTYH3Q9C0H2 523 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 RETREG1Q9H6L5 497 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 WDCPQ9H6R7 721 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 SUDS3Q9H7L9 328 aaPredicted RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 FGF21Q9NSA1 209 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 ASNSD1Q9NWL6 643 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 COX16Q9P0S2 106 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 RARRES3Q9UL19 164 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 SUFUQ9UMX1 484 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 SNX7Q9UNH6 387 aa6.32□□□□□ -1.4
NUP85-221ENST00000583548 MORC2Q9Y6X9 1032 aaPredicted RBP6.32□□□□□ -1.4
NUP85-221ENST00000583548 POLEQ07864 2286 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 IGLV3-10A0A075B6K4 115 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 TSPAN11A1L157 253 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 LILRA5A6NI73 299 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 CCL21O00585 134 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 TEX33O43247 280 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 HSF2BPO75031 334 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 CPNE3O75131 537 aaKnown RBP6.31□□□□□ -1.4
NUP85-221ENST00000583548 JRKO75564 520 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 RASSF9O75901 435 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 CEACAM5P06731 702 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 RAB40ALP0C0E4 278 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 ELFN1P0C7U0 828 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 ATXN8OSP0DMR3 200 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 ITIH2P19823 946 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 NR2F2P24468 414 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 HNRNPH3P31942 346 aaKnown RBP6.31□□□□□ -1.4
NUP85-221ENST00000583548 GGCXP38435 758 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 ARCN1P48444 511 aaKnown RBP6.31□□□□□ -1.4
NUP85-221ENST00000583548 CASP6P55212 293 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 GSDMDP57764 484 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 PITX1P78337 314 aaPredicted RBP6.31□□□□□ -1.4
NUP85-221ENST00000583548 IRX6P78412 446 aaPredicted RBP6.31□□□□□ -1.4
NUP85-221ENST00000583548 OTUD4Q01804 1114 aaKnown RBP6.31□□□□□ -1.4
NUP85-221ENST00000583548 NME3Q13232 169 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 LAMB3Q13751 1172 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 LLGL1Q15334 1064 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 NFIL3Q16649 462 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 PNCKQ6P2M8 343 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 TMEM270Q6UE05 265 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 SLC9B2Q86UD5 537 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 CUZD1Q86UP6 607 aa6.31□□□□□ -1.4
NUP85-221ENST00000583548 ZNF761Q86XN6 746 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms