RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ALG11Q2TAA5 492 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 PRRT3Q5FWE3 981 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 ZNF662Q6ZS27 426 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 RFLNAQ6ZTI6 216 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 SLCO6A1Q86UG4 719 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 PELI3Q8N2H9 469 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 CBARPQ8N350 705 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 CCHCR1Q8TD31 782 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 TSACCQ96A04 125 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 FUBP1Q96AE4 644 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 TADA1Q96BN2 335 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 TRIB3Q96RU7 358 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 SPASTQ9UBP0 616 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 FAM153AQ9UHL3 310 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 MOSPD1Q9UJG1 213 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 PNMA8BQ9ULN7 279 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 PPP2R2CQ9Y2T4 447 aa12.59□□□□□ -0.39
SMARCE1-218ENST00000582955 TMEM202A6NGA9 273 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 TRIM38O00635 465 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 SCAMP1O15126 338 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 SIGLEC6O43699 453 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 HYAL3O43820 417 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 RASGRP1O95267 797 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 TRIM16O95361 564 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 NDST3O95803 873 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 TOP3BO95985 862 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 PIRTP0C851 137 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 CTSEP14091 401 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 TRIM23P36406 574 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 GPR1P46091 355 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 HK3P52790 923 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 WNT3AP56704 352 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 SRP54P61011 504 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 DAB2P98082 770 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 DNAJC3Q13217 504 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 C1orf61Q13536 156 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 TCEA2Q15560 299 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 MEI1Q5TIA1 1274 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 ITPRIPL1Q6GPH6 555 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 LYSMD3Q7Z3D4 306 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 TECPR1Q7Z6L1 1165 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 HEATR4Q86WZ0 1026 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 IPMKQ8NFU5 416 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 OR56A4Q8NGH8 313 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 OR4C6Q8NH72 309 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 UBE2Q2Q8WVN8 375 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 SCAMP4Q969E2 229 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 AP2M1Q96CW1 435 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 PDXPQ96GD0 296 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 FCRL5Q96RD9 977 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 LYSMD1Q96S90 227 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 LRRC61Q9BV99 259 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 LGR4Q9BXB1 951 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 ABCG8Q9H221 673 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 GBA3Q9H227 469 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 PHPT1Q9NRX4 125 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 TOR4AQ9NXH8 423 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 NLGN3Q9NZ94 848 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 PKD2L2Q9NZM6 624 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 ANGPTL2Q9UKU9 493 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 SHOC2Q9UQ13 582 aa12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 COL5A1P20908 1838 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-218ENST00000582955 TCRBV7S2A1N4TA0A589 114 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 PDE2AO00408 941 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 ZNF189O75820 626 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 TNFP01375 233 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 HOXC4P09017 264 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 MYCLP1P12525 358 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 SPINK2P20155 84 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 DPTQ07507 201 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 KLF1Q13351 362 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 MPP3Q13368 585 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 DEFB133Q30KQ1 61 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 ANKRD20A2Q5SQ80 823 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 ANKRD20A1Q5TYW2 823 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 ANKRD20A3Q5VUR7 823 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 KDELC1Q6UW63 502 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 NYAP1Q6ZVC0 841 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 ZNF765Q7L2R6 523 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 NRSN1Q8IZ57 195 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 CHCHD4Q8N4Q1 142 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 SLC25A41Q8N5S1 370 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 TRIM58Q8NG06 486 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 CCDC110Q8TBZ0 833 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 ADAMTS14Q8WXS8 1223 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 OR1E3Q8WZA6 343 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 OXNAD1Q96HP4 312 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 DUSP23Q9BVJ7 150 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 RIOK2Q9BVS4 552 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 FSD1LQ9BXM9 530 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 GPR63Q9BZJ6 419 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 SUDS3Q9H7L9 328 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 ZFYVE1Q9HBF4 777 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 FGF22Q9HCT0 170 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 MRPL40Q9NQ50 206 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 DOLKQ9UPQ8 538 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 R3HDM2Q9Y2K5 976 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 ZNF711Q9Y462 761 aa12.57□□□□□ -0.4
SMARCE1-218ENST00000582955 CSNK1G3Q9Y6M4 447 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms