RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 RIMKLBQ9ULI2 386 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 COQ6Q9Y2Z9 468 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 WDFY4Q6ZS81 3184 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TBC1D3DA0A087WVF3 549 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TBC1D3IA0A087WXS9 549 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TBC1D3EA0A087X179 549 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TBC1D3KA0A087X1G2 549 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 CCDC163A0A0D9SF12 145 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 ZCWPW2A0A1B0GU75 182 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 A0A1W2PQU0 124 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TBC1D3FA6NER0 549 aaPredicted RBP9.52□□□□□ -0.89
RFFL-210ENST00000582308 FAM47DPA6NHR8 397 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TBC1D3LB9A6J9 549 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 PSMD11O00231 422 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 STX7O15400 261 aaKnown RBP9.52□□□□□ -0.89
RFFL-210ENST00000582308 GPR37L1O60883 481 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 RNGTTO60942 597 aaKnown RBP9.52□□□□□ -0.89
RFFL-210ENST00000582308 ZNF217O75362 1048 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 SLC34A2O95436 690 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 SEMA4FO95754 770 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TBC1D3HP0C7X1 549 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 C6P13671 934 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 PGAM1P18669 254 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 ARNTP27540 789 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 CD6P30203 668 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 ETV3P41162 512 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 PPP2CBP62714 309 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 PPP2CAP67775 309 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TMPRSS15P98073 1019 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 CREB5Q02930 508 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 ACVR1Q04771 509 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 LAMB3Q13751 1172 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 FGL2Q14314 439 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 ACOX1Q15067 660 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 SKIDA1Q1XH10 827 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 ZNF284Q2VY69 593 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 STEAP4Q687X5 459 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TBC1D3GQ6DHY5 549 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TBC1D3CQ6IPX1 549 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 NEK5Q6P3R8 708 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 UNC5AQ6ZN44 842 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 CEP128Q6ZU80 1094 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 NLRP9Q7RTR0 991 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 WDR5BQ86VZ2 330 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 HORMAD1Q86X24 394 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TBC1D3Q8IZP1 549 aaPredicted RBP9.52□□□□□ -0.89
RFFL-210ENST00000582308 GPR26Q8NDV2 337 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 OR13J1Q8NGT2 312 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 OR2T34Q8NGX1 318 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 CXorf40AQ8TE69 158 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 KLK6Q92876 244 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 HDAC10Q969S8 669 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 ZNF669Q96BR6 464 aaPredicted RBP9.52□□□□□ -0.89
RFFL-210ENST00000582308 NAT9Q9BTE0 207 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 GPR174Q9BXC1 333 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 C1QTNF2Q9BXJ5 285 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 SEMA4AQ9H3S1 761 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 SUDS3Q9H7L9 328 aaPredicted RBP9.52□□□□□ -0.89
RFFL-210ENST00000582308 LRRC4CQ9HCJ2 640 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 NINJ2Q9NZG7 142 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 PKP3Q9Y446 797 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.52□□□□□ -0.89
RFFL-210ENST00000582308 RPS6KL1Q9Y6S9 549 aa9.52□□□□□ -0.89
RFFL-210ENST00000582308 TNRC6BQ9UPQ9 1833 aaKnown RBP9.52□□□□□ -0.89
RFFL-210ENST00000582308 CCDC162PA2VCL2 907 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 LRRC72A6NJI9 287 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 GAPDHSO14556 408 aaPredicted RBP9.51□□□□□ -0.89
RFFL-210ENST00000582308 WNT9AO14904 365 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 LZTS3O60299 673 aaPredicted RBP9.51□□□□□ -0.89
RFFL-210ENST00000582308 TM7SF2O76062 418 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 RECQL5O94762 991 aaPredicted RBP9.51□□□□□ -0.89
RFFL-210ENST00000582308 USP1O94782 785 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 TTC4O95801 387 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 POLBP06746 335 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 BCKDHBP21953 392 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 SSTR1P30872 391 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 MAT2AP31153 395 aaKnown RBP9.51□□□□□ -0.89
RFFL-210ENST00000582308 ARCN1P48444 511 aaKnown RBP9.51□□□□□ -0.89
RFFL-210ENST00000582308 GPX6P59796 221 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 RPS21P63220 83 aaKnown RBP9.51□□□□□ -0.89
RFFL-210ENST00000582308 XIAPP98170 497 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 PDE1BQ01064 536 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 CRYMQ14894 314 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 SLMAPQ14BN4 828 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 BRD3Q15059 726 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 KYNUQ16719 465 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 USP39Q53GS9 565 aaKnown RBP9.51□□□□□ -0.89
RFFL-210ENST00000582308 SPANXN3Q5MJ09 141 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 KIAA1161Q6NSJ0 714 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 EMBQ6PCB8 327 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 TRIM69Q86WT6 500 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 CCNJLQ8IV13 435 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 PALM2Q8IXS6 379 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 NRSN1Q8IZ57 195 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 UNC5BQ8IZJ1 945 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 NELL1Q92832 810 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 PEX13Q92968 403 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 SCAMP4Q969E2 229 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 DTD2Q96FN9 168 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 CDKN2AIPNLQ96HQ2 116 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms