RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	CDK3	Q00526	305 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	B4GALNT1	Q00973	533 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ZFP36L1	Q07352	338 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ITK	Q08881	620 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MMRN1	Q13201	1228 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	C16orf72	Q14CZ0	275 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TDRD12	Q587J7	1177 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114		Q6ZVL8	140 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	USP53	Q70EK8	1073 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TRIM74	Q86UV6	250 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	BBS5	Q8N3I7	341 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	RCBTB1	Q8NDN9	531 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	GPBAR1	Q8TDU6	330 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	LRRN4	Q8WUT4	740 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NSMCE1	Q8WV22	266 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	JPH3	Q8WXH2	748 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TRIM11	Q96F44	468 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	DTD2	Q96FN9	168 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MGME1	Q9BQP7	344 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NUDT22	Q9BRQ3	303 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	THAP2	Q9H0W7	228 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PCDH18	Q9HCL0	1135 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MRPL47	Q9HD33	250 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TAAR2	Q9P1P5	351 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ST14	Q9Y5Y6	855 aa		11.62	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114		A0A1B0GTH6	734 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114		A0A1W2PQC6	194 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	C9orf172	C9J069	976 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	B4GAT1	O43505	415 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NUDT21	O43809	227 aa	Known RBP	11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PGLS	O95336	258 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MAP3K6	O95382	1288 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SERPINC1	P01008	464 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PDHA1	P08559	390 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CD48	P09326	243 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MYBL1	P10243	752 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CYP2A6	P11509	494 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CCL4	P13236	92 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PNLIP	P16233	465 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MPST	P25325	297 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	HSPA9	P38646	679 aa	Known RBP	11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ZNF135	P52742	658 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CDH6	P55285	790 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ILF3	Q12906	894 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	BIRC2	Q13490	618 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	KRT81	Q14533	505 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TSR1	Q2NL82	804 aa	Known RBP	11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	BOLA3	Q53S33	107 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ARMC12	Q5T9G4	340 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MARC1	Q5VT66	337 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NKAIN2	Q5VXU1	208 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CAVIN1	Q6NZI2	390 aa	Known RBP	11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MARK2	Q7KZI7	788 aa	Known RBP	11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PIM3	Q86V86	326 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CPNE8	Q86YQ8	564 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SLITRK4	Q8IW52	837 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	EXD3	Q8N9H8	876 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	EXTL1	Q92935	676 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MED8	Q96G25	268 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CMKLR1	Q99788	373 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	BPIFA3	Q9BQP9	254 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TEX101	Q9BY14	249 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	GSDMC	Q9BYG8	508 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ISCU	Q9H1K1	167 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ANAPC7	Q9UJX3	599 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PHTF1	Q9UMS5	762 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TMEM98	Q9Y2Y6	226 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TTLL3	Q9Y4R7	772 aa		11.61	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	TRBV23OR9-2	A0A075B6M9	112 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CAPN8	A6NHC0	703 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114		B8ZZF3	427 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NVL	O15381	856 aa	Known RBP	11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MFSD11	O43934	449 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	LIPC	P11150	499 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	WT1	P19544	449 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ADCY8	P40145	1251 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ACTR1B	P42025	376 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	GPR1	P46091	355 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PPM1F	P49593	454 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ZNF165	P49910	485 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ACTR1A	P61163	376 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CYP4F2	P78329	520 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CTBS	Q01459	385 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SLC25A11	Q02978	314 aa	Known RBP	11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NFATC3	Q12968	1075 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PIGH	Q14442	188 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	MANEA	Q5SRI9	462 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	LRRC66	Q68CR7	880 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	USP45	Q70EL2	814 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PRICKLE2	Q7Z3G6	844 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ZNF761	Q86XN6	746 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CPLX3	Q8WVH0	158 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SCAMP4	Q969E2	229 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	PMEPA1	Q969W9	287 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SGF29	Q96ES7	293 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	CCDC74B	Q96LY2	380 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	SEMA3C	Q99985	751 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	NUP85	Q9BW27	656 aa		11.6	□□□□□ -0.55
CDK5RAP3-223	ENST00000582114	ZMYND15	Q9H091	742 aa		11.6	□□□□□ -0.55

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