RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SDR42E2A6NKP2 422 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 METTL12A8MUP2 240 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TBC1D3LB9A6J9 549 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 PLK4O00444 970 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 WNT9AO14904 365 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 NDUFS2O75306 463 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 PCDH8O95206 1070 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TTC4O95801 387 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 IGHV4-34P06331 123 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TBC1D3HP0C7X1 549 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 CTPS1P17812 591 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 GM2AP17900 193 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 MCM3P25205 808 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 HOXD12P35452 270 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 SPINT3P49223 89 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 ZNF140P52738 457 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-203ENST00000580986 FRG1Q14331 258 aaKnown RBP10.39□□□□□ -0.75
CCDC47-203ENST00000580986 SKIDA1Q1XH10 827 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 SETMARQ53H47 684 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TEX35Q5T0J7 233 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 PMS2CLQ68D20 193 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TBC1D3GQ6DHY5 549 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TBC1D3CQ6IPX1 549 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 WDR93Q6P2C0 686 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 CENPUQ71F23 418 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TECPR1Q7Z6L1 1165 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TMEM135Q86UB9 458 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TSPAN33Q86UF1 283 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TBC1D3Q8IZP1 549 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-203ENST00000580986 PPHLN1Q8NEY8 458 aaKnown RBP10.39□□□□□ -0.75
CCDC47-203ENST00000580986 BLOC1S5Q8TDH9 187 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 SCG3Q8WXD2 468 aaKnown RBP10.39□□□□□ -0.75
CCDC47-203ENST00000580986 RLN3Q8WXF3 142 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 DNASE2BQ8WZ79 361 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 UBXN4Q92575 508 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 EID2BQ96D98 161 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 ERLEC1Q96DZ1 483 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 SIGLEC10Q96LC7 697 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 FMO2Q99518 471 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 GPR174Q9BXC1 333 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 GPR63Q9BZJ6 419 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 MTRF1LQ9UGC7 380 aaKnown RBP10.39□□□□□ -0.75
CCDC47-203ENST00000580986 GGT7Q9UJ14 662 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 SOX13Q9UN79 622 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 ITM2BQ9Y287 266 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TEX264Q9Y6I9 313 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 BPTFQ12830 3046 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TRPM6Q9BX84 2022 aa10.39□□□□□ -0.75
CCDC47-203ENST00000580986 TNRC6BQ9UPQ9 1833 aaKnown RBP10.39□□□□□ -0.75
CCDC47-203ENST00000580986 WDFY4Q6ZS81 3184 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 A0A1W2PPC4 97 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 A0A1W2PQU0 124 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 DLL1O00548 723 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 RECQL5O94762 991 aaPredicted RBP10.38□□□□□ -0.75
CCDC47-203ENST00000580986 USP1O94782 785 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 CLDN7O95471 211 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 PRKCGP05129 697 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 C1SP09871 688 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 RHOXF2BP0C7M4 288 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 HNRNPA2B1P22626 353 aaKnown RBP10.38□□□□□ -0.75
CCDC47-203ENST00000580986 ECHS1P30084 290 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 PLTPP55058 493 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 MRPS25P82663 173 aaKnown RBP10.38□□□□□ -0.75
CCDC47-203ENST00000580986 RPL6Q02878 288 aaKnown RBP10.38□□□□□ -0.75
CCDC47-203ENST00000580986 POU6F1Q14863 301 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 ELF2Q15723 593 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 LRRC73Q5JTD7 316 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 CERCAMQ5T4B2 595 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 SYCP2LQ5T4T6 812 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 HENMT1Q5T8I9 393 aaKnown RBP10.38□□□□□ -0.75
CCDC47-203ENST00000580986 ESRP1Q6NXG1 681 aaKnown RBP10.38□□□□□ -0.75
CCDC47-203ENST00000580986 LPCAT2Q7L5N7 544 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 FAM124AQ86V42 546 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 GPR161Q8N6U8 529 aaKnown RBP10.38□□□□□ -0.75
CCDC47-203ENST00000580986 TMEM145Q8NBT3 493 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 BIRC7Q96CA5 298 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 LOXL4Q96JB6 756 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 RHOXF2Q9BQY4 288 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 ZSCAN5AQ9BUG6 496 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 SLC17A9Q9BYT1 436 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 SEMA4AQ9H3S1 761 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 C6orf106Q9H6K1 298 aaPredicted RBP10.38□□□□□ -0.75
CCDC47-203ENST00000580986 ANKZF1Q9H8Y5 726 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 TREX1Q9NSU2 369 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 NLE1Q9NVX2 485 aaPredicted RBP10.38□□□□□ -0.75
CCDC47-203ENST00000580986 SAMD15Q9P1V8 674 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 APPL1Q9UKG1 709 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 ARL5AQ9Y689 179 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 CEP192Q8TEP8 1941 aa10.38□□□□□ -0.75
CCDC47-203ENST00000580986 NUMA1Q14980 2115 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 ESYT3A0FGR9 886 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 IGLON5A6NGN9 336 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 AGAP14A8MT82 685 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 PRAMEF26H0Y7S4 382 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 GOLGA8MH3BSY2 632 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 AURKAO14965 403 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 STX7O15400 261 aaKnown RBP10.37□□□□□ -0.75
CCDC47-203ENST00000580986 LZTS3O60299 673 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-203ENST00000580986 MMP20O60882 483 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 RHOBTB1O94844 696 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms