RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 JMJD1CQ15652 2540 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 TMEM200CA6NKL6 621 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 KIAA1324LA8MWY0 1029 aaPredicted RBP13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 C21orf140B9A014 251 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 MASP2O00187 686 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 KIF1CO43896 1103 aaKnown RBP13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 TMCC1O94876 653 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 RALGDSQ12967 914 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 UGP2Q16851 508 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 ZNF630Q2M218 657 aaPredicted RBP13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 TMCO4Q5TGY1 634 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 TCERG1LQ5VWI1 586 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 PNCKQ6P2M8 343 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 SHC4Q6S5L8 630 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 MARK2Q7KZI7 788 aaKnown RBP13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 SYVN1Q86TM6 617 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 TGM7Q96PF1 710 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 SMAD5Q99717 465 aaKnown RBP13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 ZBTB20Q9HC78 741 aaPredicted RBP13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 ACP6Q9NPH0 428 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 USP25Q9UHP3 1055 aa13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 G3BP2Q9UN86 482 aaKnown RBP13.99□□□□□ -0.17
CSNK1D-213ENST00000580446 PPP1R3GB7ZBB8 358 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 FAM155BO75949 473 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 RECKO95980 971 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 MYCLP1P12525 358 aaPredicted RBP13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 TYRP1P17643 537 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 SSTR2P30874 369 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 ACADSBP45954 432 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 HHEXQ03014 270 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 EFHC1Q5JVL4 640 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 LRRC31Q6UY01 552 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 PLPP6Q8IY26 295 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 MED15Q96RN5 788 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 NCAPGQ9BPX3 1015 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 FRMD8Q9BZ67 464 aaPredicted RBP13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 TRNAU1APQ9NX07 287 aaKnown RBP13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 DNAI1Q9UI46 699 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 TRAF3IP3Q9Y228 551 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 TMEM98Q9Y2Y6 226 aa13.98□□□□□ -0.17
CSNK1D-213ENST00000580446 SSU72P8A0A1W2PR75 194 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 GOLGA6CA6NDK9 693 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 GOLGA6BA6NDN3 693 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 RASA4BC9J798 803 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 RASA4O43374 803 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 GOLGA6DP0CG33 693 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 TRIM23P36406 574 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 FASLGP48023 281 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 NDST2P52849 883 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 KCNK10P57789 538 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 RHOAP61586 193 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 TLE4Q04727 773 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 ADAM9Q13443 819 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 ATP1A4Q13733 1029 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 ACOX1Q15067 660 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 AGERQ15109 404 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 PWWP2BQ6NUJ5 590 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 ERAP2Q6P179 960 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 BNC2Q6ZN30 1099 aaPredicted RBP13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 FAM183BPQ6ZVS7 135 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 RRAGAQ7L523 313 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 TAOK1Q7L7X3 1001 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 MRGPRGQ86SM5 289 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 TRIM74Q86UV6 250 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 ADAMTS17Q8TE56 1095 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 GRHL3Q8TE85 626 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 TTYH3Q9C0H2 523 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 KLC2Q9H0B6 622 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 WDCPQ9H6R7 721 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 AGPAT4Q9NRZ5 378 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 SEMA3GQ9NS98 782 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 GOLGA6AQ9NYA3 693 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 ATP8A1Q9Y2Q0 1164 aa13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.97□□□□□ -0.17
CSNK1D-213ENST00000580446 IGLV3-10A0A075B6K4 115 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 THAP12O43422 761 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 BUB1O43683 1085 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 RASSF9O75901 435 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 IGSF6O95976 241 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 STSP08842 583 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 FECHP22830 423 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 RPS15P62841 145 aaKnown RBP13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 PDCLQ13371 301 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 KCNAB1Q14722 419 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 STK38Q15208 465 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 VWA5B1Q5TIE3 1220 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 LYPLAL1Q5VWZ2 237 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 DENND2CQ68D51 928 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 LCN10Q6JVE6 187 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 ZNF783Q6ZMS7 281 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 TMEM110Q86TL2 294 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 ZNF354CQ86Y25 554 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 CAMK1DQ8IU85 385 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 SFRP1Q8N474 314 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 CCDC120Q96HB5 630 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 C9orf72Q96LT7 481 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 CHST11Q9NPF2 352 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 OGFRQ9NZT2 677 aa13.96□□□□□ -0.17
CSNK1D-213ENST00000580446 FARSAQ9Y285 508 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms