RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 TSTD2Q5T7W7 516 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 KIAA0895LQ68EN5 471 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 CCNI2Q6ZMN8 369 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 RFLNAQ6ZTI6 216 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 Q6ZVL8 140 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 NLRP9Q7RTR0 991 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 CYP2U1Q7Z449 544 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 CCDC25Q86WR0 208 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 IGDCC3Q8IVU1 814 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 CADM4Q8NFZ8 388 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 OR4K2Q8NGD2 314 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 OR13C4Q8NGS5 318 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 GAB3Q8WWW8 586 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 PEX13Q92968 403 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 STAMBPL1Q96FJ0 436 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 DTD2Q96FN9 168 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 ZNF778Q96MU6 729 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 EBNA1BP2Q99848 306 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 C1QTNF2Q9BXJ5 285 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 SLC17A9Q9BYT1 436 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 TSPYL1Q9H0U9 437 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 PCED1AQ9H1Q7 454 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 BPIFA1Q9NP55 256 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 SAYSD1Q9NPB0 183 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 NLE1Q9NVX2 485 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 ZSCAN32Q9NX65 697 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 PKD2L2Q9NZM6 624 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 SAMD15Q9P1V8 674 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 RIMKLBQ9ULI2 386 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 PKP3Q9Y446 797 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 MAD1L1Q9Y6D9 718 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 WDFY4Q6ZS81 3184 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 TNRC6BQ9UPQ9 1833 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 FAM237BA0A1B0GVD1 139 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 CCDC78A2IDD5 438 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 GOLGA8CPA6NN73 597 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 WNT9AO14904 365 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 LATO43561 262 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 RPP40O75818 363 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 IGHV4-34P06331 123 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 BPIP17213 487 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 NMBRP28336 390 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 MAT2AP31153 395 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 TMPRSS15P98073 1019 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 RPL6Q02878 288 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 ACVR1Q04771 509 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 SRSF5Q13243 272 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 SKIDA1Q1XH10 827 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 HP1BP3Q5SSJ5 553 aaPredicted RBP15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 CEP128Q6ZU80 1094 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 TMEM135Q86UB9 458 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 C11orf74Q86VG3 221 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 ANKMY2Q8IV38 441 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 GSPT2Q8IYD1 628 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 ZBED8Q8IZ13 594 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 NRSN1Q8IZ57 195 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 ZBTB44Q8NCP5 570 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 FBXO36Q8NEA4 188 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 OR13J1Q8NGT2 312 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 ASB12Q8WXK4 309 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.87■□□□□ 0.134e-8■■■■■ 30.1
CSNK1D-212ENST00000580061 KLK6Q92876 244 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 BIRC7Q96CA5 298 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 DNAJC1Q96KC8 554 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 TRIM56Q9BRZ2 755 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 NAT9Q9BTE0 207 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 PARD6BQ9BYG5 372 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 TREX1Q9NSU2 369 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 NFKBIL1Q9UBC1 381 aaPredicted RBP15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 SLC2A6Q9UGQ3 507 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 CHMP2BQ9UQN3 213 aa15.87■□□□□ 0.13
CSNK1D-212ENST00000580061 USP34Q70CQ2 3546 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 SPAG17Q6Q759 2223 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 METTL12A8MUP2 240 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 H7C0S8 307 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 MAP3K13O43283 966 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 HRO43593 1189 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 USP1O94782 785 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 FSBPO95073 299 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 PAK4O96013 591 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 PGAM1P18669 254 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 MCM3P25205 808 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 CNR2P34972 360 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 HADHAP40939 763 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 SGCGQ13326 291 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 ELF2Q15723 593 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 ESRP1Q6NXG1 681 aaKnown RBP15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 CES3Q6UWW8 571 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 RELL1Q8IUW5 271 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 CCNJLQ8IV13 435 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 GPR26Q8NDV2 337 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 MYRIPQ8NFW9 859 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 NUS1Q96E22 293 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 MFSD3Q96ES6 412 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 CDKN2AIPNLQ96HQ2 116 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 FCRL3Q96P31 734 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 ABCG8Q9H221 673 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 EBF2Q9HAK2 575 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 RAD18Q9NS91 495 aa15.86■□□□□ 0.13
CSNK1D-212ENST00000580061 KCTD5Q9NXV2 234 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms