RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 C20orf96Q9NUD7 363 aaPredicted RBP10.73□□□□□ -0.69
SS18-213ENST00000579640 NFKBIL1Q9UBC1 381 aaPredicted RBP10.73□□□□□ -0.69
SS18-213ENST00000579640 FETUBQ9UGM5 382 aa10.73□□□□□ -0.69
SS18-213ENST00000579640 SLC2A6Q9UGQ3 507 aa10.73□□□□□ -0.69
SS18-213ENST00000579640 RABGEF1Q9UJ41 708 aa10.73□□□□□ -0.69
SS18-213ENST00000579640 APPL1Q9UKG1 709 aa10.73□□□□□ -0.69
SS18-213ENST00000579640 FAM159BA6NKW6 160 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 A8MX80 341 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 ATP8B1O43520 1251 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 BUD23O43709 281 aaKnown RBP10.72□□□□□ -0.69
SS18-213ENST00000579640 VAPBO95292 243 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 IGLV3-19P01714 112 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 IVLP07476 585 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 C1SP09871 688 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 AOC1P19801 751 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 SPAM1P38567 509 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 SPINT3P49223 89 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 LIG3P49916 1009 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 CLCN5P51795 746 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 DCDC1P59894 354 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 CREB5Q02930 508 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 THOC5Q13769 683 aaKnown RBP10.72□□□□□ -0.69
SS18-213ENST00000579640 KIAA1161Q6NSJ0 714 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 NEK5Q6P3R8 708 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 LRIG3Q6UXM1 1119 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 CYP2U1Q7Z449 544 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 CROCCP2Q86T23 111 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 RASSF3Q86WH2 238 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 IQCKQ8N0W5 287 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 OR6P1Q8NGX9 317 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 SCG3Q8WXD2 468 aaKnown RBP10.72□□□□□ -0.69
SS18-213ENST00000579640 HDAC10Q969S8 669 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 PKNOX2Q96KN3 472 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 TBATAQ96M53 351 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 PLEKHG4BQ96PX9 1271 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 FAM167BQ9BTA0 163 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 SGK2Q9HBY8 427 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 PREBQ9HCU5 417 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 PPANQ9NQ55 473 aaKnown RBP10.72□□□□□ -0.69
SS18-213ENST00000579640 NSMCE4AQ9NXX6 385 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 USP36Q9P275 1121 aaKnown RBP10.72□□□□□ -0.69
SS18-213ENST00000579640 SERGEFQ9UGK8 458 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 PLAAQ9Y263 795 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 SCN8AQ9UQD0 1980 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 TTC28Q96AY4 2481 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 EXOC1LA0A1B0GW35 172 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 TMEM221A6NGB7 291 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 M0R296 226 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 ZNF217O75362 1048 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 TCEA3O75764 348 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 DCNP07585 359 aaKnown RBP10.72□□□□□ -0.69
SS18-213ENST00000579640 BPIP17213 487 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 ARNTP27540 789 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 OXTRP30559 389 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 CXCL12P48061 93 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 TPMTP51580 245 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 ARSDP51689 593 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 ADPRHP54922 357 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 TAS2R38P59533 333 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 TMPRSS15P98073 1019 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 SEMG2Q02383 582 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 IFFO1Q0D2I5 559 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 MTAPQ13126 283 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 UBAP2Q5T6F2 1119 aaKnown RBP10.72□□□□□ -0.69
SS18-213ENST00000579640 ANO7Q6IWH7 933 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 TRMT10BQ6PF06 316 aaKnown RBP10.72□□□□□ -0.69
SS18-213ENST00000579640 ZNF765Q7L2R6 523 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 CNTN4Q8IWV2 1026 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 OR4L1Q8NH43 312 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 OR14C36Q8NHC7 312 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 COQ10AQ96MF6 247 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 HHIPQ96QV1 700 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 ROPN1BQ9BZX4 212 aaPredicted RBP10.72□□□□□ -0.69
SS18-213ENST00000579640 ACBD3Q9H3P7 528 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 ROPN1Q9HAT0 212 aaPredicted RBP10.72□□□□□ -0.69
SS18-213ENST00000579640 BPIFA1Q9NP55 256 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 DLGAP2Q9P1A6 1054 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 ZFATQ9P243 1243 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 EBF1Q9UH73 591 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 FKBPLQ9UIM3 349 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 ITM2BQ9Y287 266 aa10.72□□□□□ -0.69
SS18-213ENST00000579640 ZNF106Q9H2Y7 1883 aaKnown RBP10.71□□□□□ -0.69
SS18-213ENST00000579640 GLYATL1P3A0A0U1RQE8 302 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 A0A0U1RQS6 177 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 CCDC162PA2VCL2 907 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 WNT9AO14904 365 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 LZTS3O60299 673 aaPredicted RBP10.71□□□□□ -0.69
SS18-213ENST00000579640 PCDH8O95206 1070 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 GOT2P00505 430 aaKnown RBP10.71□□□□□ -0.69
SS18-213ENST00000579640 C1QAP02745 245 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 C6P13671 934 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 MC4RP32245 332 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 XIAPP98170 497 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 ILF2Q12905 390 aaKnown RBP10.71□□□□□ -0.69
SS18-213ENST00000579640 PTPRCAPQ14761 206 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 ACOX1Q15067 660 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 KBTBD12Q3ZCT8 623 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 HSP90AA5PQ58FG0 334 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 MRNIPQ6NTE8 343 aa10.71□□□□□ -0.69
SS18-213ENST00000579640 NEPROQ6NW34 567 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms