RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 RAVER1Q8IY67 606 aaKnown RBP11.53□□□□□ -0.56
SSH2-208ENST00000579040 PELI3Q8N2H9 469 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 ARL14Q8N4G2 192 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 FAM46DQ8NEK8 389 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 GPBAR1Q8TDU6 330 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 KCNE4Q8WWG9 221 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 HDAC11Q96DB2 347 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 CCDC97Q96F63 343 aaPredicted RBP11.53□□□□□ -0.56
SSH2-208ENST00000579040 PRR11Q96HE9 360 aaPredicted RBP11.53□□□□□ -0.56
SSH2-208ENST00000579040 TMEM74Q96NL1 305 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 FCRL3Q96P31 734 aaPredicted RBP11.53□□□□□ -0.56
SSH2-208ENST00000579040 GSDMCQ9BYG8 508 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 FRMD8Q9BZ67 464 aaPredicted RBP11.53□□□□□ -0.56
SSH2-208ENST00000579040 DPH1Q9BZG8 443 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 STRADBQ9C0K7 418 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 SYNDIG1Q9H7V2 258 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 MRPL40Q9NQ50 206 aaKnown RBP11.53□□□□□ -0.56
SSH2-208ENST00000579040 TRNAU1APQ9NX07 287 aaKnown RBP11.53□□□□□ -0.56
SSH2-208ENST00000579040 RABGEF1Q9UJ41 708 aa11.53□□□□□ -0.56
SSH2-208ENST00000579040 RPL26L1Q9UNX3 145 aaKnown RBP11.53□□□□□ -0.56
SSH2-208ENST00000579040 A0A0J9YYE9 177 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 TEX51A0A1B0GUA7 166 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 TK2O00142 265 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 NUDT21O43809 227 aaKnown RBP11.52□□□□□ -0.57
SSH2-208ENST00000579040 AKR1B10O60218 316 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 TRBC1P01850 177 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 RPLP0P05388 317 aaKnown RBP11.52□□□□□ -0.57
SSH2-208ENST00000579040 CEACAM5P06731 702 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 IVLP07476 585 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 ITGA2BP08514 1039 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 PDHA1P08559 390 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 CCNB1P14635 433 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 CCKBRP32239 447 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 EPHB1P54762 984 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 TAS2R40P59535 323 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 CCL7P80098 99 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 SKOR1P84550 965 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 DSC2Q02487 901 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 ITKQ08881 620 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 ILF3Q12906 894 aaKnown RBP eCLIP11.52□□□□□ -0.572e-8■□□□□ 9
SSH2-208ENST00000579040 PEX6Q13608 980 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 HLTFQ14527 1009 aaKnown RBP eCLIP11.52□□□□□ -0.57
SSH2-208ENST00000579040 LRRC66Q68CR7 880 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 DENND2CQ68D51 928 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 RAET1GQ6H3X3 334 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 ZNF765Q7L2R6 523 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 GPR155Q7Z3F1 870 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 CLEC14AQ86T13 490 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 TSPAN33Q86UF1 283 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 NLRP8Q86W28 1048 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 CPNE8Q86YQ8 564 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 CCNJLQ8IV13 435 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 PQLC3Q8N755 202 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 LSM14AQ8ND56 463 aaKnown RBP11.52□□□□□ -0.57
SSH2-208ENST00000579040 ZNF830Q96NB3 372 aaPredicted RBP11.52□□□□□ -0.57
SSH2-208ENST00000579040 PACSIN1Q9BY11 444 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 LRRN3Q9H3W5 708 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 DPEP2Q9H4A9 486 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 CARS2Q9HA77 564 aaKnown RBP11.52□□□□□ -0.57
SSH2-208ENST00000579040 RBM22Q9NW64 420 aaKnown RBP eCLIP11.52□□□□□ -0.57
SSH2-208ENST00000579040 MOSPD1Q9UJG1 213 aa11.52□□□□□ -0.57
SSH2-208ENST00000579040 A0A1W2PQM1 296 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 GOLGA6CA6NDK9 693 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 GOLGA6BA6NDN3 693 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 CAPN8A6NHC0 703 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 EIF4E1BA6NMX2 242 aaKnown RBP11.51□□□□□ -0.57
SSH2-208ENST00000579040 B4DGG1 531 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 PLD2O14939 933 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 ATXN7O15265 892 aaPredicted RBP11.51□□□□□ -0.57
SSH2-208ENST00000579040 MTA2O94776 668 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 GOLGA6DP0CG33 693 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 CTPS1P17812 591 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 KDELR1P24390 212 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 ARHGAP25P42331 645 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 GPR1P46091 355 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 INHBCP55103 352 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 TMPRSS3P57727 454 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 COL9A2Q14055 689 aaPredicted RBP11.51□□□□□ -0.57
SSH2-208ENST00000579040 ZFYVE27Q5T4F4 411 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 ADAMTSL4Q6UY14 1074 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 SPRED1Q7Z699 444 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 C17orf82Q86X59 251 aaPredicted RBP11.51□□□□□ -0.57
SSH2-208ENST00000579040 VSTM4Q8IW00 320 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 RHOT2Q8IXI1 618 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 NRSN1Q8IZ57 195 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 ARRDC2Q8TBH0 407 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 TMEM159Q96B96 161 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 AP2M1Q96CW1 435 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 SCARF2Q96GP6 870 aaPredicted RBP11.51□□□□□ -0.57
SSH2-208ENST00000579040 BBC3Q96PG8 261 aaPredicted RBP11.51□□□□□ -0.57
SSH2-208ENST00000579040 RNF157Q96PX1 679 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 LYSMD1Q96S90 227 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 TDRD1Q9BXT4 1180 aaKnown RBP11.51□□□□□ -0.57
SSH2-208ENST00000579040 EPB41L5Q9HCM4 733 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 ABHD10Q9NUJ1 306 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 GOLGA6AQ9NYA3 693 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 DTLQ9NZJ0 730 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 LRIT1Q9P2V4 623 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 SLC17A4Q9Y2C5 497 aa11.51□□□□□ -0.57
SSH2-208ENST00000579040 SSUH2Q9Y2M2 353 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms