RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 EPS8L3Q8TE67 593 aaKnown RBP13.42□□□□□ -0.26
SRSF1-202ENST00000578430 DCAKDQ8WVC6 231 aa13.42□□□□□ -0.26
SRSF1-202ENST00000578430 ARRDC3Q96B67 414 aa13.42□□□□□ -0.26
SRSF1-202ENST00000578430 CPNE1Q99829 537 aa13.42□□□□□ -0.26
SRSF1-202ENST00000578430 EURLQ9NYK6 297 aa13.42□□□□□ -0.26
SRSF1-202ENST00000578430 APPL1Q9UKG1 709 aa13.42□□□□□ -0.26
SRSF1-202ENST00000578430 CA14Q9ULX7 337 aa13.42□□□□□ -0.26
SRSF1-202ENST00000578430 KCTD3Q9Y597 815 aa13.42□□□□□ -0.26
SRSF1-202ENST00000578430 MYLKQ15746 1914 aa13.42□□□□□ -0.26
SRSF1-202ENST00000578430 IQANK1A0A1B0GTG1 560 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 A0A1W2PQF6 199 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 CCDC78A2IDD5 438 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 ANTXRLA6NF34 631 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 CXorf49A8MYA2 514 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-202ENST00000578430 HMGB1P1B2RPK0 211 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-202ENST00000578430 AREL1O15033 823 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 PFDN6O15212 129 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 AP1G1O43747 822 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 ATG13O75143 517 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 KRT37O76014 449 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 KRT38O76015 456 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 CLDN7O95471 211 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 CHRNB1P11230 501 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 ADRB3P13945 408 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 OGNP20774 298 aaKnown RBP13.41□□□□□ -0.26
SRSF1-202ENST00000578430 GCAP28676 217 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 MMP12P39900 470 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 GP5P40197 560 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 PSMD8P48556 350 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 ARSDP51689 593 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 STC1P52823 247 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 COPAP53621 1224 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 RPS14P62263 151 aaKnown RBP13.41□□□□□ -0.26
SRSF1-202ENST00000578430 DNAJC3Q13217 504 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 GRTP1Q5TC63 336 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 LRRC66Q68CR7 880 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 SDCCAG8Q86SQ7 713 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-202ENST00000578430 UNC5BQ8IZJ1 945 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 GJD3Q8N144 294 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 OR4L1Q8NH43 312 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 RPLP0P6Q8NHW5 317 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 DTX3LQ8TDB6 740 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 PBXIP1Q96AQ6 731 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 MTBPQ96DY7 904 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 TBATAQ96M53 351 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 SMIM14Q96QK8 99 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 TCF12Q99081 682 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 OSBPL6Q9BZF3 934 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 CD248Q9HCU0 757 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 ZDHHC4Q9NPG8 344 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 SMYD2Q9NRG4 433 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 IARS2Q9NSE4 1012 aaKnown RBP13.41□□□□□ -0.26
SRSF1-202ENST00000578430 POLR3BQ9NW08 1133 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-202ENST00000578430 PKD2L2Q9NZM6 624 aa13.41□□□□□ -0.26
SRSF1-202ENST00000578430 NFKBIL1Q9UBC1 381 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-202ENST00000578430 NDRG2Q9UN36 371 aaKnown RBP13.41□□□□□ -0.26
SRSF1-202ENST00000578430 KANSL1LA0AUZ9 987 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 CCDC162PA2VCL2 907 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 SMIM23A6NLE4 172 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 BUD23O43709 281 aaKnown RBP13.4□□□□□ -0.26
SRSF1-202ENST00000578430 SYF2O95926 243 aaKnown RBP13.4□□□□□ -0.26
SRSF1-202ENST00000578430 GOT2P00505 430 aaKnown RBP13.4□□□□□ -0.26
SRSF1-202ENST00000578430 DNTTP04053 509 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 LHCGRP22888 699 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 SPRP35270 261 aaPredicted RBP13.4□□□□□ -0.26
SRSF1-202ENST00000578430 P2RY2P41231 377 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 SLCO1A2P46721 670 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 DCDC1P59894 354 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 PTSQ03393 145 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 EFTUD2Q15029 972 aaKnown RBP eCLIP13.4□□□□□ -0.265e-14■■□□□ 13.6
SRSF1-202ENST00000578430 TMEM52BQ4KMG9 183 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 TNFAIP8L3Q5GJ75 292 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 AARS2Q5JTZ9 985 aaKnown RBP13.4□□□□□ -0.26
SRSF1-202ENST00000578430 KIAA1211LQ6NV74 962 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 PACS1Q6VY07 963 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 NRSN1Q8IZ57 195 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 C2CD4AQ8NCU7 369 aaPredicted RBP13.4□□□□□ -0.26
SRSF1-202ENST00000578430 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.4□□□□□ -0.26
SRSF1-202ENST00000578430 EID2BQ96D98 161 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 ATP6V1G3Q96LB4 118 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 PLEKHG4BQ96PX9 1271 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 CATSPERZQ9NTU4 200 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 KCTD5Q9NXV2 234 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 FAM53CQ9NYF3 392 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 SENP1Q9P0U3 644 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 GGT7Q9UJ14 662 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 FBXO5Q9UKT4 447 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 VPS9D1Q9Y2B5 631 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 SLC30A1Q9Y6M5 507 aa13.4□□□□□ -0.26
SRSF1-202ENST00000578430 MUC6Q6W4X9 2439 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 KRBA1A5PL33 1030 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 MID1O15344 667 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 CD3EAPO15446 510 aaKnown RBP13.39□□□□□ -0.27
SRSF1-202ENST00000578430 TSPAN6O43657 245 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 SLC4A1P02730 911 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 SNRPAP09012 282 aaKnown RBP13.39□□□□□ -0.27
SRSF1-202ENST00000578430 CD72P21854 359 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 TARSP26639 723 aaKnown RBP13.39□□□□□ -0.27
SRSF1-202ENST00000578430 DRD3P35462 400 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms