RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 RANBP9Q96S59 729 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 FICDQ9BVA6 458 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 TRABDQ9H4I3 376 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 LMAN1LQ9HAT1 526 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 MAGEE1Q9HCI5 957 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 MUTYHQ9UIF7 546 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 MMP17Q9ULZ9 603 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 SCML1Q9UN30 329 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 CHKBQ9Y259 395 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 TEX264Q9Y6I9 313 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 BDP1A6H8Y1 2624 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 C1QTNF3-AMACRE9PGA6 284 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 F5H423 210 aaPredicted RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 GOLGA8MH3BSY2 632 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 RNASEH1O60930 286 aaKnown RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 USP12O75317 370 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 AVILO75366 819 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 ERLIN1O75477 346 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 PAPSS2O95340 614 aaPredicted RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 KLF8O95600 359 aaPredicted RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 TTC4O95801 387 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 FAM153BP0C7A2 387 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 H2AFXP16104 143 aaPredicted RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 TSHRP16473 764 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 C5AR1P21730 350 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 ADRA1DP25100 572 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 GKP32189 559 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 MAGEA4P43358 317 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 RPS9P46781 194 aaKnown RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 GPLD1P80108 840 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 CCDC15Q0P6D6 951 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 COL9A2Q14055 689 aaPredicted RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 CRY1Q16526 586 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 PCSK7Q16549 785 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 UGP2Q16851 508 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 SPRED3Q2MJR0 410 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 FAM153CQ494X1 144 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 RPS26P11Q5JNZ5 115 aaPredicted RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 PCID2Q5JVF3 399 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 SYCP2LQ5T4T6 812 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 FBXL19Q6PCT2 694 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 SYT13Q7L8C5 426 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 TMEM135Q86UB9 458 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 RAVER1Q8IY67 606 aaKnown RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 TXNDC5Q8NBS9 432 aaKnown RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 RPLP0P6Q8NHW5 317 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 FAM131CQ96AQ9 280 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 KLHL32Q96NJ5 620 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 MCCC1Q96RQ3 725 aaPredicted RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 EBNA1BP2Q99848 306 aaKnown RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 IER2Q9BTL4 223 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 KIFC1Q9BW19 673 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 HDAC8Q9BY41 377 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 MTG2Q9H4K7 406 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 PIF1Q9H611 641 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 MRM3Q9HC36 420 aaKnown RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 HACD3Q9P035 362 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 SARDHQ9UL12 918 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 RIMKLBQ9ULI2 386 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 NDRG2Q9UN36 371 aaKnown RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 TCF20Q9UGU0 1960 aaKnown RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 MYOFQ9NZM1 2061 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 UQCRHLA0A096LP55 91 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 A0A096LPE4 126 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 A0A0J9YYE9 177 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 FAM237BA0A1B0GVD1 139 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 A0A1W2PPZ6 126 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 TLDC2A0PJX2 215 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 MROH6A6NGR9 719 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 METTL12A8MUP2 240 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 PIGNO95427 931 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 TRBC1P01850 177 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 UGT2B4P06133 528 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 UQCRHP07919 91 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 GSTA2P09210 222 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 HOXB2P14652 356 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 NFKBIAP25963 317 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 ITGB7P26010 798 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 MAGEA9P43362 315 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 CHRNA4P43681 627 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 DGKEP52429 567 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 COPAP53621 1224 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 PDE1BQ01064 536 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 SATB1Q01826 763 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 SIGLEC14Q08ET2 396 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 PDIA2Q13087 525 aaKnown RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 OLIG2Q13516 323 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 FRG1Q14331 258 aaKnown RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 CDKN3Q16667 212 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 CCDC38Q502W7 563 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 BEND6Q5SZJ8 279 aaPredicted RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 CERCAMQ5T4B2 595 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 PKN3Q6P5Z2 889 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 TRMT10CQ7L0Y3 403 aaKnown RBP8.03□□□□□ -1.12
COPS3-215ENST00000578317 NLRP9Q7RTR0 991 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 KDELC2Q7Z4H8 507 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 TMC3Q7Z5M5 1100 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 ZSWIM9Q86XI8 627 aa8.03□□□□□ -1.12
COPS3-215ENST00000578317 AGGF1Q8N302 714 aaeCLIP8.03□□□□□ -1.12
COPS3-215ENST00000578317 CBARPQ8N350 705 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms