RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 CEP41Q9BYV8 373 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 KCNF1Q9H3M0 494 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 B4GALT6Q9UBX8 382 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 APOBEC3BQ9UH17 382 aaKnown RBP12.8□□□□□ -0.36
CCDC57-211ENST00000578187 PPIL1Q9Y3C6 166 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 KNL1Q8NG31 2342 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 LAMA5O15230 3695 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 NPIPB15A6NHN6 443 aaPredicted RBP12.79□□□□□ -0.36
CCDC57-211ENST00000578187 TPP1O14773 563 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 OPA1O60313 960 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 BRINP1O60477 761 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 PDHA1P08559 390 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 GM2AP17900 193 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 CA4P22748 312 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 NFKBIAP25963 317 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 HTR1BP28222 390 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 VIPR1P32241 457 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 IGFALSP35858 605 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 CD86P42081 329 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 LIG3P49916 1009 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 BLKP51451 505 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 RPL26P61254 145 aaKnown RBP12.79□□□□□ -0.36
CCDC57-211ENST00000578187 NR0B2Q15466 257 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 FAM182AQ5T1J6 154 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 MEI1Q5TIA1 1274 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 CCDC181Q5TID7 509 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 LIPIQ6XZB0 460 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC57-211ENST00000578187 ATL2Q8NHH9 583 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 SNIP1Q8TAD8 396 aaKnown RBP12.79□□□□□ -0.36
CCDC57-211ENST00000578187 IFI44Q8TCB0 444 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 LMX1AQ8TE12 382 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 HTR3CQ8WXA8 447 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 AGAP3Q96P47 875 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 VAT1Q99536 393 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 SLC25A51Q9H1U9 297 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 SEPT10Q9P0V9 454 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 RPL26L1Q9UNX3 145 aaKnown RBP12.79□□□□□ -0.36
CCDC57-211ENST00000578187 DOLKQ9UPQ8 538 aa12.79□□□□□ -0.36
CCDC57-211ENST00000578187 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 CAPN8A6NHC0 703 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 HEXIM1O94992 359 aaKnown RBP12.78□□□□□ -0.36
CCDC57-211ENST00000578187 PRLP01236 227 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 ANXA6P08133 673 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 ELFN1P0C7U0 828 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 CYP2A6P11509 494 aaPredicted RBP12.78□□□□□ -0.36
CCDC57-211ENST00000578187 LHCGRP22888 699 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 CD68P34810 354 aaPredicted RBP12.78□□□□□ -0.36
CCDC57-211ENST00000578187 PFN3P60673 137 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 CNGA3Q16281 694 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 TBC1D25Q3MII6 688 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 FAXCQ5TGI0 409 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 ESRP1Q6NXG1 681 aaKnown RBP12.78□□□□□ -0.36
CCDC57-211ENST00000578187 MACC1Q6ZN28 852 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 USP45Q70EL2 814 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 CDKL3Q8IVW4 592 aaPredicted RBP12.78□□□□□ -0.36
CCDC57-211ENST00000578187 TRIM58Q8NG06 486 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 WDR48Q8TAF3 677 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 SCG3Q8WXD2 468 aaKnown RBP12.78□□□□□ -0.36
CCDC57-211ENST00000578187 NAT6Q93015 286 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 GRAMD1AQ96CP6 724 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 SCRN2Q96FV2 425 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 TBATAQ96M53 351 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 COQ10AQ96MF6 247 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 GLOD4Q9HC38 313 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 PCDH9Q9HC56 1237 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 CHKBQ9Y259 395 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 COQ6Q9Y2Z9 468 aa12.78□□□□□ -0.36
CCDC57-211ENST00000578187 TDRD6O60522 2096 aaKnown RBP12.77□□□□□ -0.36
CCDC57-211ENST00000578187 ZNF106Q9H2Y7 1883 aaKnown RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 A0A0J9YYE9 177 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 CPED1A4D0V7 1026 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 GOLGA6L9A6NEM1 432 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 H7C0C1 242 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 PSMD11O00231 422 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 LZTS3O60299 673 aaPredicted RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 USP12O75317 370 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 CSO75390 466 aaKnown RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 ZNF189O75820 626 aaPredicted RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 TRBC1P01850 177 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 PTMAP06454 111 aaKnown RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 ALPIP09923 528 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 RBP3P10745 1247 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 CTSEP14091 401 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 CTPS1P17812 591 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 NFKB1P19838 968 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 RBL1P28749 1068 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 ATP5OP48047 213 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 PCBP4P57723 403 aaKnown RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 EIF3EP60228 445 aaKnown RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 PPARDQ03181 441 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 LRRC14Q15048 493 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 IRF4Q15306 451 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 RPS6KA1Q15418 735 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 CDKN3Q16667 212 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 WSCD2Q2TBF2 565 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 DEFB133Q30KQ1 61 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 PRRT3Q5FWE3 981 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 SEL1L2Q5TEA6 688 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms