RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 GNGT1P63211 74 aa18.54■□□□□ 0.56
PRKCA-203ENST00000578063 SMAD2Q15796 467 aaKnown RBP18.54■□□□□ 0.56
PRKCA-203ENST00000578063 AARS2Q5JTZ9 985 aaKnown RBP18.54■□□□□ 0.56
PRKCA-203ENST00000578063 CRTC1Q6UUV9 634 aa18.54■□□□□ 0.56
PRKCA-203ENST00000578063 RALGPS2Q86X27 583 aaPredicted RBP18.54■□□□□ 0.56
PRKCA-203ENST00000578063 CBARPQ8N350 705 aaPredicted RBP18.54■□□□□ 0.56
PRKCA-203ENST00000578063 SLC44A3Q8N4M1 653 aa18.54■□□□□ 0.56
PRKCA-203ENST00000578063 DEFB123Q8N688 67 aa18.54■□□□□ 0.56
PRKCA-203ENST00000578063 TCF12Q99081 682 aa18.54■□□□□ 0.56
PRKCA-203ENST00000578063 INTS10Q9NVR2 710 aaKnown RBP18.54■□□□□ 0.56
PRKCA-203ENST00000578063 B4GALT6Q9UBX8 382 aa18.54■□□□□ 0.56
PRKCA-203ENST00000578063 LIMD1Q9UGP4 676 aa18.54■□□□□ 0.56
PRKCA-203ENST00000578063 HCN2Q9UL51 889 aa18.54■□□□□ 0.56
PRKCA-203ENST00000578063 CORO1CQ9ULV4 474 aaPredicted RBP18.54■□□□□ 0.56
PRKCA-203ENST00000578063 VPS9D1Q9Y2B5 631 aa18.54■□□□□ 0.56
PRKCA-203ENST00000578063 FAM95CA0A1B0GW59 222 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 PFDN6O15212 129 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 HAUS5O94927 633 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 S1PR4O95977 384 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 MPOP05164 745 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 ZNF30P17039 623 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 XPAP23025 273 aaPredicted RBP18.53■□□□□ 0.56
PRKCA-203ENST00000578063 PMLP29590 882 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 RPA3P35244 121 aaPredicted RBP18.53■□□□□ 0.56
PRKCA-203ENST00000578063 CCT5P48643 541 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 NEK3P51956 506 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 STC1P52823 247 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 PTPN5P54829 565 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 PPARDQ03181 441 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 ENPP2Q13822 863 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 SEPT7Q16181 437 aaKnown RBP18.53■□□□□ 0.56
PRKCA-203ENST00000578063 LRRC66Q68CR7 880 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 TSPAN33Q86UF1 283 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 MGARPQ8TDB4 240 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 DENND1AQ8TEH3 1009 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 ATXN2LQ8WWM7 1075 aaKnown RBP18.53■□□□□ 0.56
PRKCA-203ENST00000578063 PPP1R16AQ96I34 528 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 GUCD1Q96NT3 240 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 FBRSL1Q9HCM7 1045 aaKnown RBP18.53■□□□□ 0.56
PRKCA-203ENST00000578063 CACNA2D2Q9NY47 1150 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 APPL1Q9UKG1 709 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 PPM1HQ9ULR3 514 aa18.53■□□□□ 0.56
PRKCA-203ENST00000578063 TICRRQ7Z2Z1 1910 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 A0A0U1RQS6 177 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 C16orf96A6NNT2 1141 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 KPNA3O00505 521 aaPredicted RBP18.52■□□□□ 0.56
PRKCA-203ENST00000578063 EPHX1P07099 455 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 ITGB7P26010 798 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 VIPR1P32241 457 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 CRHR1P34998 444 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 XIAPP98170 497 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 PEX6Q13608 980 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 ARHGEF7Q14155 803 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 LEXMQ3ZCV2 418 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 RNF187Q5TA31 235 aaPredicted RBP18.52■□□□□ 0.56
PRKCA-203ENST00000578063 ZDHHC20Q5W0Z9 365 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 TTC19Q6DKK2 380 aaPredicted RBP18.52■□□□□ 0.56
PRKCA-203ENST00000578063 CNSTQ6PJW8 725 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 MICALCLQ6ZW33 695 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 ZNF513Q8N8E2 541 aaPredicted RBP18.52■□□□□ 0.56
PRKCA-203ENST00000578063 TCP10LQ8TDR4 215 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 DYDC1Q8WWB3 177 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.52■□□□□ 0.565e-7■■■■■ 42.4
PRKCA-203ENST00000578063 PBXIP1Q96AQ6 731 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 SLC39A10Q9ULF5 831 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 SLC30A1Q9Y6M5 507 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 STON1Q9Y6Q2 735 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 PIAS3Q9Y6X2 628 aa18.52■□□□□ 0.56
PRKCA-203ENST00000578063 C1QTNF3-AMACRE9PGA6 284 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 GLRA3O75311 464 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 TIMP2P16035 220 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 LHCGRP22888 699 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 SPAM1P38567 509 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 TTPAP49638 278 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 POU4F1Q01851 419 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 CACNG1Q06432 222 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 PDE1CQ14123 709 aaPredicted RBP18.52■□□□□ 0.55
PRKCA-203ENST00000578063 SEMA3AQ14563 771 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 USP10Q14694 798 aaKnown RBP18.52■□□□□ 0.55
PRKCA-203ENST00000578063 PARS2Q7L3T8 475 aaKnown RBP18.52■□□□□ 0.55
PRKCA-203ENST00000578063 CMC1Q7Z7K0 106 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 LDB1Q86U70 411 aaPredicted RBP18.52■□□□□ 0.55
PRKCA-203ENST00000578063 CHPFQ8IZ52 775 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 GPATCH11Q8N954 259 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 PIP4K2CQ8TBX8 421 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 ACOX2Q99424 681 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 SLC13A1Q9BZW2 595 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 PCDH12Q9NPG4 1184 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 PRSS16Q9NQE7 514 aa18.52■□□□□ 0.55
PRKCA-203ENST00000578063 COL4A2P08572 1712 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 K7EQS6 105 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 BPIP17213 487 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 LSP1P33241 339 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 KIR2DL1P43626 348 aaPredicted RBP18.51■□□□□ 0.55
PRKCA-203ENST00000578063 SUOXP51687 545 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 PFKPQ01813 784 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 LRRC14Q15048 493 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 ZRANB3Q5FWF4 1079 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 ERAP2Q6P179 960 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 TXNDC11Q6PKC3 985 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms