RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PPARDQ03181 441 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 ITKQ08881 620 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 SLC10A2Q12908 348 aaPredicted RBP16.06■□□□□ 0.16
VAPA-204ENST00000577901 SPIDRQ14159 915 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 PDK1Q15118 436 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 TFDP3Q5H9I0 405 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 INO80CQ6PI98 192 aaPredicted RBP16.06■□□□□ 0.16
VAPA-204ENST00000577901 MFSD7Q6UXD7 560 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 CLEC14AQ86T13 490 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 CCDC50Q8IVM0 306 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 CCDC13Q8IYE1 715 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 PGBD5Q8N414 524 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 PLD5Q8N7P1 536 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 TP53I13Q8NBR0 393 aaPredicted RBP16.06■□□□□ 0.16
VAPA-204ENST00000577901 CCDC112Q8NEF3 446 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 MAML1Q92585 1016 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 ECHDC3Q96DC8 303 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 RBM41Q96IZ5 413 aaKnown RBP16.06■□□□□ 0.16
VAPA-204ENST00000577901 DESI2Q9BSY9 194 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 WRAP53Q9BUR4 548 aaKnown RBP16.06■□□□□ 0.16
VAPA-204ENST00000577901 POLR1EQ9GZS1 481 aaKnown RBP16.06■□□□□ 0.16
VAPA-204ENST00000577901 NT5MQ9NPB1 228 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 RBM22Q9NW64 420 aaKnown RBP eCLIP16.06■□□□□ 0.166e-8■■■■■ 33.4
VAPA-204ENST00000577901 AMACRQ9UHK6 382 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 PADI4Q9UM07 663 aa16.06■□□□□ 0.16
VAPA-204ENST00000577901 CCDC187A0A096LP49 1063 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 TOR1BO14657 336 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 PPP1R12AO14974 1030 aaPredicted RBP16.05■□□□□ 0.16
VAPA-204ENST00000577901 SOCS5O75159 536 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 CELA2BP08218 269 aaPredicted RBP16.05■□□□□ 0.16
VAPA-204ENST00000577901 C6P13671 934 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 CCNB1P14635 433 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 ITIH2P19823 946 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 CR2P20023 1033 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 NFKBIAP25963 317 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 NR2C2P49116 596 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 PDX1P52945 283 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 MAXP61244 160 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 DYNLT1P63172 113 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 PPIDQ08752 370 aaKnown RBP16.05■□□□□ 0.16
VAPA-204ENST00000577901 CLN3Q13286 438 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 TAZQ16635 292 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 TMEM52BQ4KMG9 183 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 KIAA1614Q5VZ46 1190 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 KAZNQ674X7 775 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 SPOCD1Q6ZMY3 1216 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 CCDC81Q6ZN84 652 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 SYCE1Q8N0S2 351 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 EXD1Q8NHP7 514 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 COL26A1Q96A83 441 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 BRD8Q9H0E9 1235 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 NOD2Q9HC29 1040 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 PCDH12Q9NPG4 1184 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 GULP1Q9UBP9 304 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 DOLKQ9UPQ8 538 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 PCDHA3Q9Y5H8 950 aa16.05■□□□□ 0.16
VAPA-204ENST00000577901 MACROD2A1Z1Q3 448 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 TTC24A2A3L6 582 aaPredicted RBP16.04■□□□□ 0.16
VAPA-204ENST00000577901 CCDC66A2RUB6 948 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 GOLGA6L3A6NEY3 463 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 B8ZZF3 427 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 NTN3O00634 580 aaPredicted RBP16.04■□□□□ 0.16
VAPA-204ENST00000577901 TRAFD1O14545 582 aaPredicted RBP16.04■□□□□ 0.16
VAPA-204ENST00000577901 ARHGAP6O43182 974 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 NRDCO43847 1150 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 CST8O60676 142 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 ITGA2BP08514 1039 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 KRT10P13645 584 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 CTNNA1P35221 906 aaKnown RBP16.04■□□□□ 0.16
VAPA-204ENST00000577901 BLKP51451 505 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 AP1B1Q10567 949 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 IRF4Q15306 451 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 ELOCQ15369 112 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 FSTL5Q8N475 847 aaPredicted RBP16.04■□□□□ 0.16
VAPA-204ENST00000577901 ARL10Q8N8L6 244 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 PDCD6IPQ8WUM4 868 aaKnown RBP16.04■□□□□ 0.16
VAPA-204ENST00000577901 SCG3Q8WXD2 468 aaKnown RBP16.04■□□□□ 0.16
VAPA-204ENST00000577901 MED8Q96G25 268 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 SEMA3CQ99985 751 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 GRPEL1Q9HAV7 217 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.04■□□□□ 0.16
VAPA-204ENST00000577901 SIRPGQ9P1W8 387 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 ATP8A1Q9Y2Q0 1164 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 TTLL3Q9Y4R7 772 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 PCDHGC4Q9Y5F7 938 aa16.04■□□□□ 0.16
VAPA-204ENST00000577901 HTRA2O43464 458 aaPredicted RBP16.03■□□□□ 0.16
VAPA-204ENST00000577901 ALPIP09923 528 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 CETN2P41208 172 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 PEX5P50542 639 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 HK3P52790 923 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 COPS2P61201 443 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 LRRC14Q15048 493 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 LVRNQ6Q4G3 990 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 ZSWIM9Q86XI8 627 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 HID1Q8IV36 788 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 NDUFAF2Q8N183 169 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 RNF10Q8N5U6 811 aaKnown RBP16.03■□□□□ 0.16
VAPA-204ENST00000577901 KYQ8NBH2 561 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 LRRN4Q8WUT4 740 aa16.03■□□□□ 0.16
VAPA-204ENST00000577901 KRT35Q92764 455 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms