RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TMC3Q7Z5M5 1100 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TTC7BQ86TV6 843 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TMEM135Q86UB9 458 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 NLRP8Q86W28 1048 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PDIK1LQ8N165 341 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 AADATQ8N5Z0 425 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 OR52K1Q8NGK4 314 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SIPA1Q96FS4 1042 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 NAT9Q9BTE0 207 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 FICDQ9BVA6 458 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 KIFC1Q9BW19 673 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PARD6BQ9BYG5 372 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 NEUROG2Q9H2A3 272 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SLC32A1Q9H598 525 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MRM3Q9HC36 420 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 BFARQ9NZS9 450 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TEX264Q9Y6I9 313 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TEP1Q99973 2627 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RGSL1A5PLK6 1076 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CAPN8A6NHC0 703 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PSMD11O00231 422 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 KPNA3O00505 521 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MID1O15344 667 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SPINT1O43278 529 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 LDB2O43679 373 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 USP12O75317 370 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZNF217O75362 1048 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ALDH1A2O94788 518 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CPP00450 1065 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 DNTTP04053 509 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ADRB3P13945 408 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZNF30P17039 623 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 NDUFV2P19404 249 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 HNF1BP35680 557 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 P2RY2P41231 377 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CHRNA4P43681 627 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TNNT3P45378 269 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 METAP1P53582 386 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ARL4CP56559 192 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PDE1BQ01064 536 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ACVR1Q04771 509 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ELP6Q0PNE2 266 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 OLIG2Q13516 323 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 FRG1Q14331 258 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TAF1AQ15573 450 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PCSK7Q16549 785 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 HIF1AQ16665 826 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PCID2Q5JVF3 399 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 FNBP1LQ5T0N5 605 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 AGBL4Q5VU57 503 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 USP45Q70EL2 814 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 DPPA4Q7L190 304 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PARS2Q7L3T8 475 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 NLRP9Q7RTR0 991 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PIP4P1Q86T03 277 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TMEFF1Q8IYR6 380 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 AGGF1Q8N302 714 aaeCLIP11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CHCHD4Q8N4Q1 142 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TAB3Q8N5C8 712 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 GRIN3AQ8TCU5 1115 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SGSM3Q96HU1 749 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TXLNGYQ9BZA5 131 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 DUSP15Q9H1R2 295 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CLMPQ9H6B4 373 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MTRF1LQ9UGC7 380 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RAXQ9Y2V3 346 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 FADS3Q9Y5Q0 445 aa11.15□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TEX15Q9BXT5 2789 aa11.15□□□□□ -0.63
CDK5RAP3-204ENST00000577664 A0A087WV48 116 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FAM237BA0A1B0GVD1 139 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TCRBV21S2A2A0A5A6 115 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 HEATR9A2RTY3 570 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 F5H423 210 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 H7C0S8 307 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TSPAN6O43657 245 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PLRG1O43660 514 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 AVILO75366 819 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 APBB3O95704 486 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CYP2A6P11509 494 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TSHRP16473 764 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 OXTRP30559 389 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MMP12P39900 470 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TPMTP51580 245 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 EPHB1P54762 984 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TAS2R38P59533 333 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 VSNL1P62760 191 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SIM1P81133 766 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PTSQ03393 145 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CNTN1Q12860 1018 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 GALNT3Q14435 633 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MAP7D1Q3KQU3 841 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TTC31Q49AM3 519 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MSS51Q4VC12 460 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 DNAJC21Q5F1R6 531 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CERCAMQ5T4B2 595 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FBXL19Q6PCT2 694 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CRTC1Q6UUV9 634 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CENPUQ71F23 418 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TTC30BQ8N4P2 665 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms