RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 FRG2Q64ET8 278 aa2.57□□□□□ -2
COPS3-213ENST00000577210 ACSM2BQ68CK6 577 aa2.57□□□□□ -2
COPS3-213ENST00000577210 ZNF280DQ6N043 979 aa2.57□□□□□ -2
COPS3-213ENST00000577210 ZNF549Q6P9A3 640 aa2.57□□□□□ -2
COPS3-213ENST00000577210 KLHL35Q6PF15 583 aa2.57□□□□□ -2
COPS3-213ENST00000577210 TAOK1Q7L7X3 1001 aa2.57□□□□□ -2
COPS3-213ENST00000577210 FJX1Q86VR8 437 aa2.57□□□□□ -2
COPS3-213ENST00000577210 ZC3HC1Q86WB0 502 aaKnown RBP2.57□□□□□ -2
COPS3-213ENST00000577210 TDRPQ86YL5 185 aa2.57□□□□□ -2
COPS3-213ENST00000577210 MCEMP1Q8IX19 187 aa2.57□□□□□ -2
COPS3-213ENST00000577210 ADGRF2Q8IZF7 708 aa2.57□□□□□ -2
COPS3-213ENST00000577210 CNTROBQ8N137 903 aa2.57□□□□□ -2
COPS3-213ENST00000577210 PRR26Q8N8Z3 221 aa2.57□□□□□ -2
COPS3-213ENST00000577210 OIT3Q8WWZ8 545 aa2.57□□□□□ -2
COPS3-213ENST00000577210 ERP27Q96DN0 273 aa2.57□□□□□ -2
COPS3-213ENST00000577210 FEM1CQ96JP0 617 aa2.57□□□□□ -2
COPS3-213ENST00000577210 ZNF385AQ96PM9 386 aaKnown RBP2.57□□□□□ -2
COPS3-213ENST00000577210 PCGF1Q9BSM1 259 aa2.57□□□□□ -2
COPS3-213ENST00000577210 HEMGNQ9BXL5 484 aa2.57□□□□□ -2
COPS3-213ENST00000577210 TEX12Q9BXU0 123 aa2.57□□□□□ -2
COPS3-213ENST00000577210 TM6SF1Q9BZW5 370 aa2.57□□□□□ -2
COPS3-213ENST00000577210 EBF3Q9H4W6 596 aa2.57□□□□□ -2
COPS3-213ENST00000577210 RANGRFQ9HD47 186 aaPredicted RBP2.57□□□□□ -2
COPS3-213ENST00000577210 LTB4R2Q9NPC1 389 aa2.57□□□□□ -2
COPS3-213ENST00000577210 MKKSQ9NPJ1 570 aaPredicted RBP2.57□□□□□ -2
COPS3-213ENST00000577210 HINT3Q9NQE9 182 aaKnown RBP2.57□□□□□ -2
COPS3-213ENST00000577210 PCDHB16Q9NRJ7 776 aa2.57□□□□□ -2
COPS3-213ENST00000577210 MCM9Q9NXL9 1143 aa2.57□□□□□ -2
COPS3-213ENST00000577210 ABI3Q9P2A4 366 aa2.57□□□□□ -2
COPS3-213ENST00000577210 FBXW11Q9UKB1 542 aa2.57□□□□□ -2
COPS3-213ENST00000577210 NFS1Q9Y697 457 aa2.57□□□□□ -2
COPS3-213ENST00000577210 CEPT1Q9Y6K0 416 aa2.57□□□□□ -2
COPS3-213ENST00000577210 CAPN7Q9Y6W3 813 aa2.57□□□□□ -2
COPS3-213ENST00000577210 RSF1Q96T23 1441 aaPredicted RBP2.57□□□□□ -2
COPS3-213ENST00000577210 RUSC2Q8N2Y8 1516 aa2.57□□□□□ -2
COPS3-213ENST00000577210 LOC100509620A0A075B734 347 aa2.56□□□□□ -2
COPS3-213ENST00000577210 A0A0U1RQG5 324 aaPredicted RBP2.56□□□□□ -2
COPS3-213ENST00000577210 INAFM1C9JVW0 142 aa2.56□□□□□ -2
COPS3-213ENST00000577210 PTGES3LE9PB15 166 aa2.56□□□□□ -2
COPS3-213ENST00000577210 I6L893 689 aaPredicted RBP2.56□□□□□ -2
COPS3-213ENST00000577210 HS3ST1O14792 307 aa2.56□□□□□ -2
COPS3-213ENST00000577210 SPINT2O43291 252 aa2.56□□□□□ -2
COPS3-213ENST00000577210 HSPA12AO43301 675 aa2.56□□□□□ -2
COPS3-213ENST00000577210 ZIC3O60481 467 aa2.56□□□□□ -2
COPS3-213ENST00000577210 TMCC2O75069 709 aa2.56□□□□□ -2
COPS3-213ENST00000577210 SEC31AO94979 1220 aaKnown RBP2.56□□□□□ -2
COPS3-213ENST00000577210 SRPRAP08240 638 aaKnown RBP2.56□□□□□ -2
COPS3-213ENST00000577210 IGHV4-30-4P0DP06 118 aa2.56□□□□□ -2
COPS3-213ENST00000577210 TGFB3P10600 412 aa2.56□□□□□ -2
COPS3-213ENST00000577210 FCGR1AP12314 374 aa2.56□□□□□ -2
COPS3-213ENST00000577210 SRCP12931 536 aa2.56□□□□□ -2
COPS3-213ENST00000577210 SAT1P21673 171 aa2.56□□□□□ -2
COPS3-213ENST00000577210 MAPK4P31152 587 aa2.56□□□□□ -2
COPS3-213ENST00000577210 KRT20P35900 424 aa2.56□□□□□ -2
COPS3-213ENST00000577210 THPOP40225 353 aa2.56□□□□□ -2
COPS3-213ENST00000577210 LMAN1P49257 510 aa2.56□□□□□ -2
COPS3-213ENST00000577210 PCYT1AP49585 367 aa2.56□□□□□ -2
COPS3-213ENST00000577210 EFNA5P52803 228 aa2.56□□□□□ -2
COPS3-213ENST00000577210 TERF1P54274 439 aa2.56□□□□□ -2
COPS3-213ENST00000577210 EEF1A1P68104 462 aaKnown RBP2.56□□□□□ -2
COPS3-213ENST00000577210 CSNK2A1P68400 391 aaPredicted RBP2.56□□□□□ -2
COPS3-213ENST00000577210 POU3F1Q03052 451 aaPredicted RBP2.56□□□□□ -2
COPS3-213ENST00000577210 EPS8Q12929 822 aa2.56□□□□□ -2
COPS3-213ENST00000577210 GRIK3Q13003 919 aa2.56□□□□□ -2
COPS3-213ENST00000577210 CHAF1BQ13112 559 aa2.56□□□□□ -2
COPS3-213ENST00000577210 MAD2L1Q13257 205 aaPredicted RBP2.56□□□□□ -2
COPS3-213ENST00000577210 CUL4AQ13619 759 aa2.56□□□□□ -2
COPS3-213ENST00000577210 CTTNQ14247 550 aaKnown RBP2.56□□□□□ -2
COPS3-213ENST00000577210 WTAPQ15007 396 aa2.56□□□□□ -2
COPS3-213ENST00000577210 CTF1Q16619 201 aa2.56□□□□□ -2
COPS3-213ENST00000577210 C15orf59Q2T9L4 293 aaPredicted RBP2.56□□□□□ -2
COPS3-213ENST00000577210 RILPL1Q5EBL4 403 aa2.56□□□□□ -2
COPS3-213ENST00000577210 DCST1Q5T197 706 aa2.56□□□□□ -2
COPS3-213ENST00000577210 CFAP58Q5T655 872 aa2.56□□□□□ -2
COPS3-213ENST00000577210 EEF1A1P5Q5VTE0 462 aa2.56□□□□□ -2
COPS3-213ENST00000577210 ARMC3Q5W041 872 aa2.56□□□□□ -2
COPS3-213ENST00000577210 FAM205BPQ63HN1 556 aa2.56□□□□□ -2
COPS3-213ENST00000577210 JADE1Q6IE81 842 aa2.56□□□□□ -2
COPS3-213ENST00000577210 LRRC8EQ6NSJ5 796 aa2.56□□□□□ -2
COPS3-213ENST00000577210 TRNP1Q6NT89 227 aa2.56□□□□□ -2
COPS3-213ENST00000577210 CCNI2Q6ZMN8 369 aaPredicted RBP2.56□□□□□ -2
COPS3-213ENST00000577210 PQLC2Q6ZP29 291 aa2.56□□□□□ -2
COPS3-213ENST00000577210 MTSS1LQ765P7 747 aa2.56□□□□□ -2
COPS3-213ENST00000577210 SLC35F3Q8IY50 421 aa2.56□□□□□ -2
COPS3-213ENST00000577210 TAGAPQ8N103 731 aa2.56□□□□□ -2
COPS3-213ENST00000577210 OR8H2Q8N162 312 aa2.56□□□□□ -2
COPS3-213ENST00000577210 SPATA6LQ8N4H0 392 aa2.56□□□□□ -2
COPS3-213ENST00000577210 CSNK2A3Q8NEV1 391 aa2.56□□□□□ -2
COPS3-213ENST00000577210 THAP6Q8TBB0 222 aa2.56□□□□□ -2
COPS3-213ENST00000577210 SNRNP27Q8WVK2 155 aaKnown RBP2.56□□□□□ -2
COPS3-213ENST00000577210 JAKMIP2Q96AA8 810 aa2.56□□□□□ -2
COPS3-213ENST00000577210 NSUN4Q96CB9 384 aaKnown RBP2.56□□□□□ -2
COPS3-213ENST00000577210 RTP4Q96DX8 246 aa2.56□□□□□ -2
COPS3-213ENST00000577210 RRNAD1Q96FB5 475 aaKnown RBP2.56□□□□□ -2
COPS3-213ENST00000577210 C1orf74Q96LT6 269 aa2.56□□□□□ -2
COPS3-213ENST00000577210 CMTM3Q96MX0 182 aa2.56□□□□□ -2
COPS3-213ENST00000577210 DUX5Q96PT3 197 aa2.56□□□□□ -2
COPS3-213ENST00000577210 LBHD1Q9BQE6 289 aaPredicted RBP2.56□□□□□ -2
COPS3-213ENST00000577210 NUDT16L1Q9BRJ7 211 aaKnown RBP2.56□□□□□ -2
COPS3-213ENST00000577210 USP44Q9H0E7 712 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms