RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 C11orf70Q9BRQ4 267 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 KLC2Q9H0B6 622 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 NUP62CLQ9H1M0 184 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 OSBPL2Q9H1P3 480 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 ZDHHC6Q9H6R6 413 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 DYRK4Q9NR20 520 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 FAM207AQ9NSI2 230 aaPredicted RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 KLHL11Q9NVR0 708 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 WHRNQ9P202 907 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 NOCTQ9UK39 431 aaKnown RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 PCDHB1Q9Y5F3 818 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 FADS3Q9Y5Q0 445 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 FAM208BQ5VWN6 2430 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 CACNA1GO43497 2377 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 LAMA5O15230 3695 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 LY6G6EA0A0G2JKS1 128 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 SSU72P8A0A1W2PR75 194 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 ANKRD62A6NC57 917 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 IGLON5A6NGN9 336 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 C2CD4BA6NLJ0 364 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 KRIT1O00522 736 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 BRINP1O60477 761 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 MAGEC1O60732 1142 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 PPM1BO75688 479 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 LSM8O95777 96 aaKnown RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 MT-CO3P00414 261 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 PRB1P04280 392 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 CYP1A1P04798 512 aaPredicted RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 ADRB3P13945 408 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 HNRNPA2B1P22626 353 aaKnown RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 MMP8P22894 467 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 ACP1P24666 158 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 AKT2P31751 481 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 L1CAMP32004 1257 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 RFC1P35251 1148 aaPredicted RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 HNF1BP35680 557 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 NUDT1P36639 197 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 RECQLP46063 649 aaPredicted RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 NEK3P51956 506 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 JAM2P57087 298 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 POLR2FP61218 127 aaKnown RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 CDR2Q01850 454 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 OVGP1Q12889 678 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 PTP4A2Q12974 167 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 MTA1Q13330 715 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 FZD2Q14332 565 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 RTP5Q14D33 572 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 ACAP1Q15027 740 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 KRT31Q15323 416 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 ATXN7L2Q5T6C5 722 aaPredicted RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 MANEALQ5VSG8 457 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 RETSATQ6NUM9 610 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 NEK5Q6P3R8 708 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 PTAR1Q7Z6K3 402 aaPredicted RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 ABI3BPQ7Z7G0 1075 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 NLRP14Q86W24 1093 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 PYROXD2Q8N2H3 581 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 PCDH20Q8N6Y1 951 aaKnown RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 OR4C6Q8NH72 309 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 NXPE2Q96DL1 559 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 APOLD1Q96LR9 279 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 CCDC114Q96M63 670 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 KLF6Q99612 283 aaPredicted RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 HEPHQ9BQS7 1158 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 SLC17A9Q9BYT1 436 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 TCEAL2Q9H3H9 227 aaPredicted RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 FANCLQ9NW38 375 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 DNAJC28Q9NX36 388 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 SLAMF8Q9P0V8 285 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 HECAQ9UBI9 543 aaPredicted RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 PPARGC1AQ9UBK2 798 aaKnown RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 OR12D3Q9UGF7 316 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 ADAMTS6Q9UKP5 1117 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 TCFL5Q9UL49 500 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 NEU3Q9UQ49 428 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 CLCA2Q9UQC9 943 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 PAXBP1Q9Y5B6 917 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 OAS3Q9Y6K5 1087 aaKnown RBP6.31□□□□□ -1.4
NUP88-212ENST00000576708 U3KQA8 63 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 CELSR3Q9NYQ7 3312 aa6.31□□□□□ -1.4
NUP88-212ENST00000576708 C16orf96A6NNT2 1141 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 A6NNZ2 444 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 K7ESM1 405 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 INSIG1O15503 277 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 OPA1O60313 960 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 MPOP05164 745 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 UGT2B4P06133 528 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 PLEKP08567 350 aaPredicted RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 UNGP13051 313 aaPredicted RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 EEF1GP26641 437 aaKnown RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 RPL10P27635 214 aaKnown RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 SDC4P31431 198 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 SOX5P35711 763 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 ABCG1P45844 678 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 HDAC4P56524 1084 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 PCBP3P57721 371 aaKnown RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 RPS21P63220 83 aaKnown RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 CCDC173Q0VFZ6 552 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 ILKQ13418 452 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms