RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PRR7Q8TB68 274 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 NCSTNQ92542 709 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 METTL5Q9NRN9 209 aaKnown RBP16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 UBA2Q9UBT2 640 aaPredicted RBP16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 KLHL3Q9UH77 587 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 DNAJC12Q9UKB3 198 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 MAN1B1Q9UKM7 699 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 ZDHHC9Q9Y397 364 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 DNAJB5O75953 348 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 CLDN1O95832 211 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 DLGAP3O95886 979 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 ELAVL4P26378 380 aaKnown RBP16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 EPHB2P29323 1055 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 SERPINA4P29622 427 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 EXOC3L4Q17RC7 722 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 CCDC14Q49A88 953 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 TAF3Q5VWG9 929 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 AFMIDQ63HM1 303 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 DENND2CQ68D51 928 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 CCDC185Q8N715 623 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 TUBGCP5Q96RT8 1024 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 FRMD8Q9BZ67 464 aaPredicted RBP16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 ULBP3Q9BZM4 244 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 ATP13A3Q9H7F0 1226 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 CROTQ9UKG9 612 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 MAP4K5Q9Y4K4 846 aa16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 OAS3Q9Y6K5 1087 aaKnown RBP16.24■□□□□ 0.19
CTDNEP1-211ENST00000575783 PIPSLA2A3N6 862 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 GOLGA6CA6NDK9 693 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 GOLGA6BA6NDN3 693 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 INPP4BO15327 924 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 GOLGA6DP0CG33 693 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 PON1P27169 355 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 ERCC5P28715 1186 aaPredicted RBP16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 CDH5P33151 784 aaPredicted RBP16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 PMS2P54278 862 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 RIPPLY3P57055 190 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 YBEYP58557 167 aaPredicted RBP16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 BPIFB4P59827 614 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 POLR2LP62875 67 aaKnown RBP16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 MRPL49Q13405 166 aaKnown RBP16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 NADK2Q4G0N4 442 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 DOK6Q6PKX4 331 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 C6orf15Q6UXA7 325 aaPredicted RBP16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 DPPA4Q7L190 304 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 SRLQ86TD4 932 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 TICAM1Q8IUC6 712 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 PYROXD2Q8N2H3 581 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 RTL3Q8N8U3 475 aaKnown RBP16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 GPT2Q8TD30 523 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 RXFP2Q8WXD0 754 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 CPA5Q8WXQ8 436 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 NUS1Q96E22 293 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 TEX101Q9BY14 249 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 TWSG1Q9GZX9 223 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 GOLGA6AQ9NYA3 693 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 HOOK1Q9UJC3 728 aaKnown RBP16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 DOCK4Q8N1I0 1966 aa16.23■□□□□ 0.19
CTDNEP1-211ENST00000575783 TCP11X1B4DZS4 312 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 J3KR12 359 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 SDC4P31431 198 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 MAPK9P45984 424 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 RGRP47804 291 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 BCL2L1Q07817 233 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 FOXM1Q08050 763 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 PARP15Q460N3 678 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 WDR74Q6RFH5 385 aaPredicted RBP16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 FAM71AQ8IYT1 594 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 MSANTD4Q8NCY6 345 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 COQ10AQ96MF6 247 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 MAP10Q9P2G4 905 aa16.22■□□□□ 0.19
CTDNEP1-211ENST00000575783 MAP3K6O95382 1288 aa16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 CYP11B1P15538 503 aa16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 ZNF28P17035 718 aa16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 CDK3Q00526 305 aa16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 NFATC2Q13469 925 aa16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 MAP7Q14244 749 aa16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 ARCQ7LC44 396 aa16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 TSEN2Q8NCE0 465 aaKnown RBP16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 GALNT6Q8NCL4 622 aa16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 SLC37A2Q8TED4 501 aa16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 TRIM55Q9BYV6 548 aa16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 B4GALT6Q9UBX8 382 aa16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 ARHGEF17Q96PE2 2063 aaPredicted RBP16.21■□□□□ 0.19
CTDNEP1-211ENST00000575783 OTOGQ6ZRI0 2925 aa16.21■□□□□ 0.18
CTDNEP1-211ENST00000575783 GOLGA6L4A6NEF3 574 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 CREB3O43889 395 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 IVLP07476 585 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 FASLGP48023 281 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 PGDP52209 483 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 PAK1Q13153 545 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 INPP5JQ15735 1006 aaPredicted RBP16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 NAA35Q5VZE5 725 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 MARK2Q7KZI7 788 aaKnown RBP16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 FAM172AQ8WUF8 416 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 ECHDC3Q96DC8 303 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 STAMBPL1Q96FJ0 436 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 SIX2Q9NPC8 291 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 RCOR3Q9P2K3 495 aaPredicted RBP16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 KCND3Q9UK17 655 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms