RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 GALPQ9UBC7 116 aa23.64■■□□□ 1.37
NPLOC4-217ENST00000574897 STOML1Q9UBI4 398 aa23.64■■□□□ 1.37
NPLOC4-217ENST00000574897 LHX3Q9UBR4 397 aa23.64■■□□□ 1.37
NPLOC4-217ENST00000574897 FKBPLQ9UIM3 349 aa23.64■■□□□ 1.37
NPLOC4-217ENST00000574897 CPQQ9Y646 472 aa23.64■■□□□ 1.37
NPLOC4-217ENST00000574897 F8W8V4 182 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 K7ERQ8 282 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 TEX28O15482 410 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 PRDX6P30041 224 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 PPARGP37231 505 aaPredicted RBP23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 TBL3Q12788 808 aaKnown RBP23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 TCHHL1Q5QJ38 904 aaPredicted RBP23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 CLEC6AQ6EIG7 209 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 PSAPL1Q6NUJ1 521 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 PGM2L1Q6PCE3 622 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 SDCCAG8Q86SQ7 713 aaPredicted RBP23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 MYLK4Q86YV6 388 aaPredicted RBP23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 NMRK1Q9NWW6 199 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 VPS28Q9UK41 221 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 IKZF3Q9UKT9 509 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 ARHGAP26Q9UNA1 814 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 COPG1Q9Y678 874 aaKnown RBP23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 CCDC189A1A4V9 331 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 SUPT7LO94864 414 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 SIX3O95343 332 aaPredicted RBP23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 CSF2RAP15509 400 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 CSKP41240 450 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 NUDT2P50583 147 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 CDH13P55290 713 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 HERC6Q8IVU3 1022 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 KIRREL3Q8IZU9 778 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 LPGAT1Q92604 370 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 CCDC126Q96EE4 140 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 FEM1AQ9BSK4 669 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 RTKNQ9BST9 563 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 SAGE1Q9NXZ1 904 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 SPG21Q9NZD8 308 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 RIMKLBQ9ULI2 386 aa23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 KIAA0100Q14667 2235 aaKnown RBP23.63■■□□□ 1.37
NPLOC4-217ENST00000574897 ANKRD66B4E2M5 251 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 UBXN8O00124 270 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 PPP6CO00743 305 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 CSPG5O95196 566 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 PRAMEF12O95522 483 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 EPHB3P54753 998 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 PDAP1Q13442 181 aaKnown RBP23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 PPP1R3AQ16821 1122 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 ZNF678Q5SXM1 525 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 C6orf163Q5TEZ5 329 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 LRRC74BQ6ZQY2 392 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 FAM43BQ6ZT52 329 aaPredicted RBP23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 OR6K2Q8NGY2 324 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 N4BP2L2Q92802 583 aaPredicted RBP23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 MAELQ96JY0 434 aaKnown RBP23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 CCDC28BQ9BUN5 200 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 PLK2Q9NYY3 685 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 LRRC42Q9Y546 428 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 ACRP10323 421 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 HDCP19113 662 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 IMPDH1P20839 514 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 SUOXP51687 545 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 UNC50Q53HI1 259 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 FBXO48Q5FWF7 155 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 PAQR3Q6TCH7 311 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 TCEAL8Q8IYN2 117 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 CPSF7Q8N684 471 aaKnown RBP23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 RSRC1Q96IZ7 334 aaKnown RBP23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 VPS51Q9UID3 782 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 STOML2Q9UJZ1 356 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 PPM1HQ9ULR3 514 aa23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 ARIH1Q9Y4X5 557 aaPredicted RBP23.62■■□□□ 1.37
NPLOC4-217ENST00000574897 OR1I1O60431 355 aa23.61■■□□□ 1.37
NPLOC4-217ENST00000574897 CCNT2O60583 730 aaKnown RBP23.61■■□□□ 1.37
NPLOC4-217ENST00000574897 RHOBTB1O94844 696 aa23.61■■□□□ 1.37
NPLOC4-217ENST00000574897 NCEH1Q6PIU2 408 aa23.61■■□□□ 1.37
NPLOC4-217ENST00000574897 AFTPHQ6ULP2 937 aa23.61■■□□□ 1.37
NPLOC4-217ENST00000574897 SNX31Q8N9S9 440 aa23.61■■□□□ 1.37
NPLOC4-217ENST00000574897 RCN3Q96D15 328 aa23.61■■□□□ 1.37
NPLOC4-217ENST00000574897 SLC30A3Q99726 388 aa23.61■■□□□ 1.37
NPLOC4-217ENST00000574897 TM6SF2Q9BZW4 377 aa23.61■■□□□ 1.37
NPLOC4-217ENST00000574897 OR51B4Q9Y5P0 310 aa23.61■■□□□ 1.37
NPLOC4-217ENST00000574897 RGSL1A5PLK6 1076 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 C2orf81A6NN90 581 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 GJA1P17302 382 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 SLC26A3P40879 764 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 TRIM68Q6AZZ1 485 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 DDX53Q86TM3 631 aaKnown RBP23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 SLC22A9Q8IVM8 553 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 HS6ST3Q8IZP7 471 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 APCDD1Q8J025 514 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 PTGR2Q8N8N7 351 aaPredicted RBP23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 HIPK4Q8NE63 616 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 GIMAP7Q8NHV1 300 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 TMA16Q96EY4 203 aaKnown RBP23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 NAF1Q96HR8 494 aaKnown RBP23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 TTC1Q99614 292 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 EIF4E1BA6NMX2 242 aaKnown RBP23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 SRP72O76094 671 aaKnown RBP23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 LUC7L3O95232 432 aaKnown RBP23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 THRAP10827 490 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms