RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ESX1Q8N693 406 aa11.92□□□□□ -0.5
CTNS-208ENST00000574218 GPT2Q8TD30 523 aa11.92□□□□□ -0.5
CTNS-208ENST00000574218 RAB6CQ9H0N0 254 aa11.92□□□□□ -0.5
CTNS-208ENST00000574218 NOL6Q9H6R4 1146 aaKnown RBP11.92□□□□□ -0.5
CTNS-208ENST00000574218 TMEM9Q9P0T7 183 aa11.92□□□□□ -0.5
CTNS-208ENST00000574218 DACH1Q9UI36 760 aa11.92□□□□□ -0.5
CTNS-208ENST00000574218 RWDD2AQ9UIY3 292 aa11.92□□□□□ -0.5
CTNS-208ENST00000574218 TEP1Q99973 2627 aaKnown RBP11.91□□□□□ -0.5
CTNS-208ENST00000574218 ANKRD62A6NC57 917 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 ARHGAP42A6NI28 874 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 C2CD4BA6NLJ0 364 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 POLR1CO15160 346 aaPredicted RBP11.91□□□□□ -0.5
CTNS-208ENST00000574218 RFPL1O75677 317 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 PALMO75781 387 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 CEACAM5P06731 702 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 MMEP08473 750 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 PRKCSHP14314 528 aaPredicted RBP11.91□□□□□ -0.5
CTNS-208ENST00000574218 NR1D1P20393 614 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 GPD1P21695 349 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 GNLYP22749 145 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 CSNK1DP48730 415 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 MAN2A1Q16706 1144 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 RAET1GQ6H3X3 334 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 TCTN3Q6NUS6 607 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 DOK6Q6PKX4 331 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 ZNF677Q86XU0 584 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 FAM114A1Q8IWE2 563 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 UMODL1-AS1Q8N2C9 162 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 BMPERQ8N8U9 685 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 GALNT11Q8NCW6 608 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 PHF12Q96QT6 1004 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 C11orf70Q9BRQ4 267 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 SELENOOQ9BVL4 669 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 FRMD8Q9BZ67 464 aaPredicted RBP11.91□□□□□ -0.5
CTNS-208ENST00000574218 MAGEB5Q9BZ81 275 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 SP110Q9HB58 689 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 FBXO8Q9NRD0 319 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 POLHQ9Y253 713 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 TMEM184BQ9Y519 407 aaPredicted RBP11.91□□□□□ -0.5
CTNS-208ENST00000574218 CENPEQ02224 2701 aa11.91□□□□□ -0.5
CTNS-208ENST00000574218 A0A1W2PQ67 120 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 WASH4PA8MWX3 477 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 J3KR12 359 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 PRAMEF11O60813 436 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 IVLP07476 585 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 CYP2A6P11509 494 aaPredicted RBP11.9□□□□□ -0.5
CTNS-208ENST00000574218 KRT3P12035 628 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 DLSTP36957 453 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 ADCY8P40145 1251 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 STAT5AP42229 794 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 MAPK9P45984 424 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 UQCRFS1P47985 274 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 NDST2P52849 883 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 HDAC4P56524 1084 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 TPI1P60174 286 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 CDK3Q00526 305 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 MAP7Q14244 749 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 ATP1A1-AS1Q5TC04 95 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 CAPRIN2Q6IMN6 1127 aaKnown RBP11.9□□□□□ -0.5
CTNS-208ENST00000574218 TIPARPQ7Z3E1 657 aaKnown RBP11.9□□□□□ -0.5
CTNS-208ENST00000574218 NOP9Q86U38 636 aaKnown RBP11.9□□□□□ -0.5
CTNS-208ENST00000574218 ZNF761Q86XN6 746 aaPredicted RBP11.9□□□□□ -0.5
CTNS-208ENST00000574218 PYROXD2Q8N2H3 581 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 TSEN2Q8NCE0 465 aaKnown RBP11.9□□□□□ -0.5
CTNS-208ENST00000574218 JOSD2Q8TAC2 188 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 CPT1CQ8TCG5 803 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 PDCD6IPQ8WUM4 868 aaKnown RBP11.9□□□□□ -0.5
CTNS-208ENST00000574218 NCSTNQ92542 709 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 SH3KBP1Q96B97 665 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 ECHDC3Q96DC8 303 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 OR2M4Q96R27 311 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 TEX101Q9BY14 249 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 PDFQ9HBH1 243 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 B4GALT6Q9UBX8 382 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 FHOD1Q9Y613 1164 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 KCNMB2Q9Y691 235 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 RPS6KL1Q9Y6S9 549 aa11.9□□□□□ -0.5
CTNS-208ENST00000574218 ITPR2Q14571 2701 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 TRBV23OR9-2A0A075B6M9 112 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.89□□□□□ -0.51
CTNS-208ENST00000574218 A1L4Q6 167 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 KATNA1O75449 491 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 MMP8P22894 467 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 VIPR1P32241 457 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 HTR7P34969 479 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 GPR1P46091 355 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 FASLGP48023 281 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 SCNN1BP51168 640 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 RENBPP51606 427 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 AIF1P55008 147 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 AP1S1P61966 158 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 ERV3-1Q14264 604 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 WDR74Q6RFH5 385 aaPredicted RBP11.89□□□□□ -0.51
CTNS-208ENST00000574218 GALNT13Q8IUC8 556 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 PELI3Q8N2H9 469 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 LZTR1Q8N653 840 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 SLC37A2Q8TED4 501 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 CENPIQ92674 756 aaPredicted RBP11.89□□□□□ -0.51
CTNS-208ENST00000574218 STAMBPL1Q96FJ0 436 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 CELF6Q96J87 481 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms