RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TRBC1P01850 177 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 COMTP21964 271 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 CD86P42081 329 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 SLC1A1P43005 524 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 GNPDA1P46926 289 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 CDK3Q00526 305 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 PPIDQ08752 370 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 NIPAL4Q0D2K0 466 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 SPIDRQ14159 915 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 IHHQ14623 411 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 C3orf38Q5JPI3 329 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 ALG1LQ6GMV1 187 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 FOXR1Q6PIV2 292 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 RFLNAQ6ZTI6 216 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 B4GALNT4Q76KP1 1039 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 CCDC170Q8IYT3 715 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 SPC24Q8NBT2 197 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 CCL4L1Q8NHW4 92 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 AP2M1Q96CW1 435 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 ATXN7L3BQ96GX2 97 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 TEX101Q9BY14 249 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 GOLPH3Q9H4A6 298 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 DDX56Q9NY93 547 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 PPIL1Q9Y3C6 166 aa12.68□□□□□ -0.38
NPLOC4-213ENST00000573519 A0A087WV48 116 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 CAPN8A6NHC0 703 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 ZNF487B1APH4 448 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 PPP1R12AO14974 1030 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 TCEA3O75764 348 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 LCA5LO95447 670 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 CLDN7O95471 211 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 ZFXP17010 805 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 ZNF30P17039 623 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 CYLC1P35663 651 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 EIF2S3P41091 472 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 ABCG1P45844 678 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 POLD2P49005 469 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 PTSQ03393 145 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 ZBTB17Q13105 803 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 PDK1Q15118 436 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 LLGL1Q15334 1064 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 SPA17Q15506 151 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 TBC1D25Q3MII6 688 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 LRRC38Q5VT99 294 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 SLC9A4Q6AI14 798 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 RAD9BQ6WBX8 426 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 KDELC2Q7Z4H8 507 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 TECPR1Q7Z6L1 1165 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 SFTPA2Q8IWL1 248 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 CBARPQ8N350 705 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 Q8N9G6 341 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 WDR48Q8TAF3 677 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 FGF11Q92914 225 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 SCAMP4Q969E2 229 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 NAF1Q96HR8 494 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 AGAP3Q96P47 875 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 GFM1Q96RP9 751 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 ABCG8Q9H221 673 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 POLR1BQ9H9Y6 1135 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 RABGEF1Q9UJ41 708 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 DNPEPQ9ULA0 475 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 SUFUQ9UMX1 484 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 SATB2Q9UPW6 733 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 EPN1Q9Y6I3 576 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 DMXL2Q8TDJ6 3036 aa12.67□□□□□ -0.38
NPLOC4-213ENST00000573519 LRP4O75096 1905 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 MYLKQ15746 1914 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 C1orf232A0A0U1RR37 186 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 RCCD1A6NED2 376 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 INPP4BO15327 924 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 NDUFA10O95299 355 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 RPLP0P05388 317 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 CEACAM5P06731 702 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 FECHP22830 423 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 ITPKBP27987 946 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 LSSP48449 732 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 CCL7P80098 99 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 IFI35P80217 286 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 SKOR1P84550 965 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 DPTQ07507 201 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 CCDC173Q0VFZ6 552 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 ILF3Q12906 894 aaKnown RBP eCLIP12.66□□□□□ -0.381e-7■□□□□ 10.2
NPLOC4-213ENST00000573519 BIRC2Q13490 618 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 GALNT3Q14435 633 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 TCEAL1Q15170 157 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 PCSK7Q16549 785 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 C14orf28Q4W4Y0 310 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 KAZNQ674X7 775 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 MFSD7Q6UXD7 560 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 MARK2Q7KZI7 788 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 PDZD3Q86UT5 571 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 TRIM74Q86UV6 250 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 VSIG1Q86XK7 387 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 TMTC1Q8IUR5 882 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 LSMEM2Q8N112 164 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 CNTD1Q8N815 330 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 OR6C4Q8NGE1 309 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 KIAA1524Q8TCG1 905 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 PTCD2Q8WV60 388 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 CRELD1Q96HD1 420 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms