RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 ACTL7BQ9Y614 415 aa13.68□□□□□ -0.22
CCDC40-209ENST00000573474 OR51F1A6NGY5 319 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 SHISA7A6NL88 538 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 TRIM49D1C9J1S8 452 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 ADH1BP00325 375 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 AHSGP02765 367 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 OGNP20774 298 aaKnown RBP13.67□□□□□ -0.22
CCDC40-209ENST00000573474 SLC1A2P43004 574 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 PSMD8P48556 350 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 PTSQ03393 145 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 CTBP1Q13363 440 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 HSF5Q4G112 596 aaPredicted RBP13.67□□□□□ -0.22
CCDC40-209ENST00000573474 FASTKD1Q53R41 847 aaKnown RBP13.67□□□□□ -0.22
CCDC40-209ENST00000573474 LRRC73Q5JTD7 316 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 MROH9Q5TGP6 573 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 ZDHHC20Q5W0Z9 365 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 LRRC66Q68CR7 880 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 FBXL19Q6PCT2 694 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 ZNF852Q6ZMS4 543 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 TIFABQ6ZNK6 161 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 ERN2Q76MJ5 926 aaKnown RBP13.67□□□□□ -0.22
CCDC40-209ENST00000573474 GALNT7Q86SF2 657 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 CILP2Q8IUL8 1156 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 DENND6AQ8IWF6 608 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 OR2T3Q8NH03 318 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 FAM76AQ8TAV0 307 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 SCG3Q8WXD2 468 aaKnown RBP13.67□□□□□ -0.22
CCDC40-209ENST00000573474 PBXIP1Q96AQ6 731 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 MCMBPQ9BTE3 642 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 FKBPLQ9UIM3 349 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 SORCS3Q9UPU3 1222 aa13.67□□□□□ -0.22
CCDC40-209ENST00000573474 A0A1W2PPM1 405 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 HMX2A2RU54 273 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 FOXO6A8MYZ6 492 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 ADAM23O75077 832 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 S1PR4O95977 384 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 ITGA2BP08514 1039 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 BPIP17213 487 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 NR1D1P20393 614 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 LHCGRP22888 699 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 GABRB3P28472 473 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 MC4RP32245 332 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 MMP12P39900 470 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 LEPRP48357 1165 aaKnown RBP13.66□□□□□ -0.22
CCDC40-209ENST00000573474 CD151P48509 253 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 POLD2P49005 469 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 NEK3P51956 506 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 STC1P52823 247 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 METAP1P53582 386 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 LIMK2P53671 638 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 XIAPP98170 497 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 MPP1Q00013 466 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 SATB1Q01826 763 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 SEMG2Q02383 582 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 PRKCQQ04759 706 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 ELP6Q0PNE2 266 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 PEX6Q13608 980 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 BMPR2Q13873 1038 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 CCINQ13939 588 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 CST6Q15828 149 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 ZNF776Q68DI1 518 aaPredicted RBP13.66□□□□□ -0.22
CCDC40-209ENST00000573474 ZC3HC1Q86WB0 502 aaKnown RBP13.66□□□□□ -0.22
CCDC40-209ENST00000573474 SRRM1Q8IYB3 904 aaKnown RBP13.66□□□□□ -0.22
CCDC40-209ENST00000573474 ARFGAP2Q8N6H7 521 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 TXNDC5Q8NBS9 432 aaKnown RBP13.66□□□□□ -0.22
CCDC40-209ENST00000573474 RAB7BQ96AH8 199 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 TCF12Q99081 682 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 RHOJQ9H4E5 214 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 RAD18Q9NS91 495 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 PKD2L2Q9NZM6 624 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 MARCH4Q9P2E8 410 aaPredicted RBP13.66□□□□□ -0.22
CCDC40-209ENST00000573474 THEGQ9P2T0 379 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 APPL1Q9UKG1 709 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 SLC30A1Q9Y6M5 507 aa13.66□□□□□ -0.22
CCDC40-209ENST00000573474 RGSL1A5PLK6 1076 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 C19orf67A6NJJ6 358 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 PFDN6O15212 129 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 POLR3GO15318 223 aaPredicted RBP13.65□□□□□ -0.22
CCDC40-209ENST00000573474 C1SP09871 688 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 ADRB3P13945 408 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 HOXB2P14652 356 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 C5AR1P21730 350 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 PMLP29590 882 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 FOXN2P32314 431 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 HPDP32754 393 aaPredicted RBP13.65□□□□□ -0.22
CCDC40-209ENST00000573474 SPAM1P38567 509 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 SPINT3P49223 89 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 RPS14P62263 151 aaKnown RBP13.65□□□□□ -0.22
CCDC40-209ENST00000573474 PPP2R2AP63151 447 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 CACNG1Q06432 222 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 CCDC15Q0P6D6 951 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 ZRANB3Q5FWF4 1079 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 AARS2Q5JTZ9 985 aaKnown RBP13.65□□□□□ -0.22
CCDC40-209ENST00000573474 EOGTQ5NDL2 527 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 MICALCLQ6ZW33 695 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 RAVER1Q8IY67 606 aaKnown RBP13.65□□□□□ -0.22
CCDC40-209ENST00000573474 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC40-209ENST00000573474 ALKBH8Q96BT7 664 aaKnown RBP13.65□□□□□ -0.22
CCDC40-209ENST00000573474 ERLEC1Q96DZ1 483 aa13.65□□□□□ -0.22
CCDC40-209ENST00000573474 VPS39Q96JC1 886 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms