RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 ETV3P41162 512 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 COPB1P53618 953 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 CDK3Q00526 305 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 TLE1Q04724 770 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 SLC10A7Q0GE19 358 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 KCNAB2Q13303 367 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 PPP6R3Q5H9R7 873 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 TMCO4Q5TGY1 634 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 NKAIN2Q5VXU1 208 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 DENND2CQ68D51 928 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 PPP1R2P3Q6NXS1 205 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 HSD11B1LQ7Z5J1 315 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 PSTKQ8IV42 348 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 NAGSQ8N159 534 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 LZTR1Q8N653 840 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 IL22RA1Q8N6P7 574 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 ARFGAP1Q8N6T3 406 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 ZNF564Q8TBZ8 553 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 PTCD2Q8WV60 388 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 PATE1Q8WXA2 126 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 ART4Q93070 314 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 PMEPA1Q969W9 287 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 DTD2Q96FN9 168 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 SCARF2Q96GP6 870 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 NUDCD1Q96RS6 583 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 PEBP4Q96S96 227 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 SNRNP25Q9BV90 132 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 ASPSCR1Q9BZE9 553 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 FANCLQ9NW38 375 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 SLC39A1Q9NY26 324 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 PCSK1NQ9UHG2 260 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 TUBD1Q9UJT1 453 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 PHTF1Q9UMS5 762 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 SLC17A4Q9Y2C5 497 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 PCDHGC4Q9Y5F7 938 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 B3GALT1Q9Y5Z6 326 aa9.85□□□□□ -0.83
TRAPPC1-205ENST00000572656 TTC24A2A3L6 582 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 TMEM191CA6NGB0 347 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 B4E171 279 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 CAPN5O15484 640 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 PRPSAP2O60256 369 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 RNF8O76064 485 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 PEX11BO96011 259 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 THRAP10827 490 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 FERP16591 822 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 CR2P20023 1033 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 LHCGRP22888 699 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 MPSTP25325 297 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 MIPP30301 263 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 CSF2RBP32927 897 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 TSPAN7P41732 249 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 ACTR1BP42025 376 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 CCR10P46092 362 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 POLD2P49005 469 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 POLE2P56282 527 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 ACTR1AP61163 376 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 GPLD1P80108 840 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 UBXN1Q04323 297 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 DPTQ07507 201 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 DPYSQ14117 519 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 ZNF235Q14590 738 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 DCAF12Q5T6F0 453 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 RAET1GQ6H3X3 334 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 PLEKHA7Q6IQ23 1121 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 TMEM71Q6P5X7 295 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 Q6ZVL8 140 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 PTRH1Q86Y79 214 aaKnown RBP9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 TP53INP2Q8IXH6 220 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 CACNA2D3Q8IZS8 1091 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 ANKRD20A12PQ8NF67 263 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 PDCD6IPQ8WUM4 868 aaKnown RBP9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 SCRN2Q96FV2 425 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 CATSPER2Q96P56 530 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 ERGIC2Q96RQ1 377 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 NOD2Q9HC29 1040 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 KCNK4Q9NYG8 393 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 TAS2R14Q9NYV8 317 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 CWC15Q9P013 229 aaKnown RBP9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 PDP2Q9P2J9 529 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 LIMA1Q9UHB6 759 aaKnown RBP9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 SPTA1P02549 2419 aa9.84□□□□□ -0.83
TRAPPC1-205ENST00000572656 GOLGA6CA6NDK9 693 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 GOLGA6BA6NDN3 693 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 NPIPB15A6NHN6 443 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 LRRC10BA6NIK2 292 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 ZNF891A8MT65 544 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 TMCO5BA8MYB1 307 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 RAD1O60671 282 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 GOLGA6DP0CG33 693 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 TNFAIP3P21580 790 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 RAB15P59190 212 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 TRAF2Q12933 501 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 RALGPS1Q5JS13 557 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 DOK6Q6PKX4 331 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 ADAMTSL4Q6UY14 1074 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 CYP4V2Q6ZWL3 525 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 IRF2BP2Q7Z5L9 587 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 TECPR1Q7Z6L1 1165 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 TSPAN33Q86UF1 283 aa9.83□□□□□ -0.84
TRAPPC1-205ENST00000572656 FAM129CQ86XR2 697 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms