RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 TEAD4Q15561 434 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 SLC1A5Q15758 541 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 CCNG2Q16589 344 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 LONRF2Q1L5Z9 754 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 PPM1JQ5JR12 505 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 ESRP1Q6NXG1 681 aaKnown RBP6.98□□□□□ -1.29
SMG6-209ENST00000571442 RANBP10Q6VN20 620 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 DBX2Q6ZNG2 339 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 USP45Q70EL2 814 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 TMC3Q7Z5M5 1100 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 RABEPKQ7Z6M1 372 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 PIP4P1Q86T03 277 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 TRIM74Q86UV6 250 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 TTC30BQ8N4P2 665 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 GPR26Q8NDV2 337 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 DEFB124Q8NES8 71 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 NUS1Q96E22 293 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 ELF4Q99607 663 aaPredicted RBP6.98□□□□□ -1.29
SMG6-209ENST00000571442 APOOQ9BUR5 198 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 ETNK1Q9HBU6 452 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 MRPL40Q9NQ50 206 aaKnown RBP6.98□□□□□ -1.29
SMG6-209ENST00000571442 TM7SF3Q9NS93 570 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 KCND1Q9NSA2 647 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 PIH1D1Q9NWS0 290 aaKnown RBP6.98□□□□□ -1.29
SMG6-209ENST00000571442 UCKL1Q9NWZ5 548 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 TRHDEQ9UKU6 1024 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 TMPRSS11EQ9UL52 423 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 CNOT6Q9ULM6 557 aaKnown RBP6.98□□□□□ -1.29
SMG6-209ENST00000571442 TPX2Q9ULW0 747 aaKnown RBP6.98□□□□□ -1.29
SMG6-209ENST00000571442 RPL26L1Q9UNX3 145 aaKnown RBP6.98□□□□□ -1.29
SMG6-209ENST00000571442 ZNF711Q9Y462 761 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 KCTD3Q9Y597 815 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 USP24Q9UPU5 2620 aa6.98□□□□□ -1.29
SMG6-209ENST00000571442 KMT2BQ9UMN6 2715 aaPredicted RBP6.98□□□□□ -1.29
SMG6-209ENST00000571442 C1orf232A0A0U1RR37 186 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 SPTY2D1-AS1A0A0U1RR47 76 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 TCRBV7S3A2A0A539 114 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 TMEM202A6NGA9 273 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 PSMD11O00231 422 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 GAPDHSO14556 408 aaPredicted RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 FOXD2O60548 495 aaPredicted RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 CBFA2T3O75081 653 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 IFNB1P01574 187 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 ITGAVP06756 1048 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 MYF5P13349 255 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 BPIP17213 487 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 TPH1P17752 444 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 EPHA8P29322 1005 aaPredicted RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 TRIM23P36406 574 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 RABIFP47224 123 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 RXRGP48443 463 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 SPINT3P49223 89 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 GEMP55040 296 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 MTM1Q13496 603 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 ARHGEF7Q14155 803 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 TCEA2Q15560 299 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 TRIP13Q15645 432 aaPredicted RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 CYP1B1Q16678 543 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 PARP6Q2NL67 630 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 ALG11Q2TAA5 492 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 ZNF648Q5T619 568 aaPredicted RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 HENMT1Q5T8I9 393 aaKnown RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 PAPD7Q5XG87 772 aaKnown RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 ALS2CLQ60I27 953 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 PNCKQ6P2M8 343 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 DRICH1Q6PGQ1 229 aaPredicted RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 IQCHQ86VS3 1027 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 ZSCAN30Q86W11 494 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 CREG2Q8IUH2 290 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 SFTPA2Q8IWL1 248 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 SLC25A45Q8N413 288 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 PDCD7Q8N8D1 485 aaKnown RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 ACTRT1Q8TDG2 376 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 SAP25Q8TEE9 199 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 UBE2Q2Q8WVN8 375 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 OR1E3Q8WZA6 343 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 TSACCQ96A04 125 aaPredicted RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 IFT43Q96FT9 208 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 PDXPQ96GD0 296 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 PBKQ96KB5 322 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 CAPZA3Q96KX2 299 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 RIOK2Q9BVS4 552 aaKnown RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 ZDHHC5Q9C0B5 715 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 MAGEE1Q9HCI5 957 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 FGF22Q9HCT0 170 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 BPIFA1Q9NP55 256 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 ARFGAP3Q9NP61 516 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 GDF3Q9NR23 364 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 TTC7AQ9ULT0 858 aaPredicted RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 ZNF148Q9UQR1 794 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 NEU2Q9Y3R4 380 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 ST14Q9Y5Y6 855 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 ARL5AQ9Y689 179 aa6.97□□□□□ -1.29
SMG6-209ENST00000571442 OAS3Q9Y6K5 1087 aaKnown RBP6.97□□□□□ -1.29
SMG6-209ENST00000571442 CCL22O00626 93 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 TRIM38O00635 465 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 CASC3O15234 703 aaKnown RBP6.96□□□□□ -1.3
SMG6-209ENST00000571442 INPP4BO15327 924 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 PIAS2O75928 621 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 AP2A1O95782 977 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms