RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 ERVK-6Q9BXR3 956 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 MPP6Q9NZW5 540 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 ABT1Q9ULW3 272 aaKnown RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 SLC45A1Q9Y2W3 748 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 LRRC14BA6NHZ5 514 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 ZNF701M0R085 212 aaPredicted RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 PIP5K1BO14986 540 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 ANGPT2O15123 496 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 FGF10O15520 208 aaPredicted RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 ZSCAN9O15535 394 aaPredicted RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 IRAK2O43187 625 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 MSI1O43347 362 aaKnown RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 CDK14O94921 469 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 ATE1O95260 518 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 SIX3O95343 332 aaPredicted RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 F2P00734 622 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 BDNFP23560 247 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 SLC6A2P23975 617 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 HOXC13P31276 330 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 SERPINH1P50454 418 aaKnown RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 CCT8P50990 548 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 FOXA1P55317 472 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 EIF4EBP2Q13542 120 aaPredicted RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 ATP6AP1Q15904 470 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 PRMT9Q6P2P2 845 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 LYSMD3Q7Z3D4 306 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 ZNF467Q7Z7K2 595 aaPredicted RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 ZNF554Q86TJ5 538 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 OR6P1Q8NGX9 317 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 CENPNQ96H22 339 aaPredicted RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 FEM1CQ96JP0 617 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 FCRL2Q96LA5 508 aaPredicted RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 MYRFLQ96LU7 910 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 C9orf16Q9BUW7 83 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 HIPK3Q9H422 1215 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 CATSPERBQ9H7T0 1116 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 CXorf21Q9HAI6 301 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 ARNT2Q9HBZ2 717 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 POLR3BQ9NW08 1133 aaPredicted RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 ACTR3BQ9P1U1 418 aa16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 MARCH4Q9P2E8 410 aaPredicted RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 TDRKHQ9Y2W6 561 aaKnown RBP16.88■□□□□ 0.29
PCDHB19P-201ENST00000570871 OR51F1A6NGY5 319 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 ARPC2O15144 300 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 ACOX3O15254 700 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 S1PR4O95977 384 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 IMPDH2P12268 514 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 ARSDP51689 593 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 BNIP2Q12982 314 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 PMS2P3Q13401 168 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 TIGD7Q6NT04 549 aaPredicted RBP16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 DPP9Q86TI2 863 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 RBM12BQ8IXT5 1001 aaKnown RBP16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 OFCC1Q8IZS5 231 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 MIER2Q8N344 545 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 SCAMP5Q8TAC9 235 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 MID1IP1Q9NPA3 183 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 CRYL1Q9Y2S2 319 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 SLC4A1P02730 911 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 MAXP61244 160 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 ADAM17P78536 824 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 NFKB2Q00653 900 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 GEN1Q17RS7 908 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 Q6ZNX1 250 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 GPR142Q7Z601 462 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 TRIM74Q86UV6 250 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 TRIM73Q86UV7 250 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 PHYKPLQ8IUZ5 450 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 RYBPQ8N488 228 aaPredicted RBP16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 PTGR2Q8N8N7 351 aaPredicted RBP16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 GABPB2Q8TAK5 448 aaPredicted RBP16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 TWIST2Q8WVJ9 160 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 HDAC10Q969S8 669 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 PPP1R14BQ96C90 147 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 RPL10LQ96L21 214 aaKnown RBP16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 KCNA7Q96RP8 456 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 PARK7Q99497 189 aaKnown RBP16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 CDH7Q9ULB5 785 aa16.87■□□□□ 0.29
PCDHB19P-201ENST00000570871 TTC24A2A3L6 582 aaPredicted RBP16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 CLOCKO15516 846 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 RASAL1O95294 804 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 MTHFD1P11586 935 aaKnown RBP16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 ANKDD1AQ495B1 522 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 SPRED1Q7Z699 444 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 DDIASQ8IXT1 998 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 SMYD1Q8NB12 490 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 SEPT8Q92599 483 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 LRRC58Q96CX6 371 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 NSUN5Q96P11 429 aaKnown RBP16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 GAD1Q99259 594 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 RTP3Q9BQQ7 232 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 SLC25A51Q9H1U9 297 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 TUBB1Q9H4B7 451 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 ATP13A1Q9HD20 1204 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 FAIMQ9NVQ4 179 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 H3BMQ9 156 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 EI24O14681 340 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 AZIN1O14977 448 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 SLC10A3P09131 477 aa16.86■□□□□ 0.29
PCDHB19P-201ENST00000570871 GFAPP14136 432 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms