RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 PRKD2Q9BZL6 878 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 SENP6Q9GZR1 1112 aaPredicted RBP15.31■□□□□ 0.04
USP43-202ENST00000570475 ABCG8Q9H221 673 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 HACD3Q9P035 362 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 USP22Q9UPT9 525 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 WDR81Q562E7 1941 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 TMX2-CTNND1H3BSU7 103 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 CDK4P11802 303 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 LBPP18428 481 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 SLC7A1P30825 629 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 CRYBB1P53674 252 aaPredicted RBP15.31■□□□□ 0.04
USP43-202ENST00000570475 SH3BP2P78314 561 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 GRM2Q14416 872 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 TECRLQ5HYJ1 363 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 BPIFB6Q8NFQ5 453 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 TMCO1Q9UM00 188 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 A0A087WXM4 84 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 CLASP2O75122 1294 aaKnown RBP15.31■□□□□ 0.04
USP43-202ENST00000570475 ZBTB11O95625 1053 aaPredicted RBP15.31■□□□□ 0.04
USP43-202ENST00000570475 GOT2P00505 430 aaKnown RBP15.31■□□□□ 0.04
USP43-202ENST00000570475 ITGB1P05556 798 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 AXLP30530 894 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 BFSP2Q13515 415 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 IMPG1Q17R60 797 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 ALFQ53S48 1182 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 DRAXINQ8NBI3 349 aaPredicted RBP15.31■□□□□ 0.04
USP43-202ENST00000570475 NUDT8Q8WV74 236 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 EGFL8Q99944 293 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 ADAM2Q99965 735 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 IGSF5Q9NSI5 407 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 U3KQV3 271 aa15.31■□□□□ 0.04
USP43-202ENST00000570475 A0A1W2PPW3 197 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 CCDC154A6NI56 674 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 CD3EAPO15446 510 aaKnown RBP15.3■□□□□ 0.04
USP43-202ENST00000570475 RAMP2O60895 175 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 KCNE1P15382 129 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 ZNF26P17031 533 aaPredicted RBP15.3■□□□□ 0.04
USP43-202ENST00000570475 NAA20P61599 178 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 LSM3P62310 102 aaKnown RBP15.3■□□□□ 0.04
USP43-202ENST00000570475 TWF1Q12792 350 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 MAMDC4Q6UXC1 1216 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 RETREG3Q86VR2 466 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 ZNF419Q96HQ0 510 aaPredicted RBP15.3■□□□□ 0.04
USP43-202ENST00000570475 C17orf80Q9BSJ5 609 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 HGH1Q9BTY7 390 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 CXorf21Q9HAI6 301 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 ABCC13Q9NSE7 274 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 SMOXQ9NWM0 555 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.3■□□□□ 0.04
USP43-202ENST00000570475 HS3ST4Q9Y661 456 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 MOXD2PA6NHM9 499 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 J3QRK9 145 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 IRAK2O43187 625 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 B4GAT1O43505 415 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 OXTRP30559 389 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 AGTR2P50052 363 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 TAF12Q16514 161 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 PTPRNQ16849 979 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 TMEM26Q6ZUK4 368 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 C2CD4AQ8NCU7 369 aaPredicted RBP15.3■□□□□ 0.04
USP43-202ENST00000570475 OR10Q1Q8NGQ4 319 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 GIPC3Q8TF64 312 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 FBXL8Q96CD0 374 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 NMUR1Q9HB89 426 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 NME4O00746 187 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 UBFD1O14562 309 aaKnown RBP15.3■□□□□ 0.04
USP43-202ENST00000570475 FFAR3O14843 346 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 GPR42O15529 346 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 MYCP01106 439 aaPredicted RBP15.3■□□□□ 0.04
USP43-202ENST00000570475 IRF1P10914 325 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 FSCN1Q16658 493 aaKnown RBP15.3■□□□□ 0.04
USP43-202ENST00000570475 PAQR3Q6TCH7 311 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 PTERQ96BW5 349 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 PLEKHG4BQ96PX9 1271 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 TMEM165Q9HC07 324 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 DNAJC15Q9Y5T4 150 aa15.3■□□□□ 0.04
USP43-202ENST00000570475 SSC5DA1L4H1 1573 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 CCDC162PA2VCL2 907 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 NPEPPSL1A6NEC2 478 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 LDLRP01130 860 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 LIPEQ05469 1076 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 BNIP3Q12983 259 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 NR6A1Q15406 480 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 ANKS6Q68DC2 871 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 KIAA0930Q6ICG6 404 aaPredicted RBP15.29■□□□□ 0.04
USP43-202ENST00000570475 ALKAL1Q6UXT8 129 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 UTS2BQ765I0 119 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 TMEM86AQ8N2M4 240 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 TMEM151AQ8N4L1 468 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 LPCAT1Q8NF37 534 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 NT5C3BQ969T7 300 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 GPR78Q96P69 363 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 DNAAF2Q9NVR5 837 aaKnown RBP15.29■□□□□ 0.04
USP43-202ENST00000570475 SUCOQ9UBS9 1254 aaKnown RBP15.29■□□□□ 0.04
USP43-202ENST00000570475 RAD54BQ9Y620 910 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 KANSL1LA0AUZ9 987 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 CAPN3P20807 821 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 CA8P35219 290 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 ACVRL1P37023 503 aa15.29■□□□□ 0.04
USP43-202ENST00000570475 MAGEA12P43365 314 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms