RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 CDKAL1Q5VV42 579 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 RAET1GQ6H3X3 334 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 MARK2Q7KZI7 788 aaKnown RBP12.06□□□□□ -0.48
CAPN3-220ENST00000569827 ZNF438Q7Z4V0 828 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 FAM129CQ86XR2 697 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 UNC5BQ8IZJ1 945 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 PGBD5Q8N414 524 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 GPBAR1Q8TDU6 330 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 COQ10AQ96MF6 247 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 CTRCQ99895 268 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 FRMD8Q9BZ67 464 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-220ENST00000569827 ZNF71Q9NQZ8 489 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-220ENST00000569827 GEMIN8Q9NWZ8 242 aaKnown RBP12.06□□□□□ -0.48
CAPN3-220ENST00000569827 TMEM98Q9Y2Y6 226 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 MED13Q9UHV7 2174 aa12.06□□□□□ -0.48
CAPN3-220ENST00000569827 TEX15Q9BXT5 2789 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 NPIPB15A6NHN6 443 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-220ENST00000569827 DAPK3O43293 454 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 CPP00450 1065 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 ADCY8P40145 1251 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 CSNK1DP48730 415 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 POLE2P56282 527 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 ILF3Q12906 894 aaKnown RBP eCLIP12.05□□□□□ -0.48
CAPN3-220ENST00000569827 TRAF2Q12933 501 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 FKBP15Q5T1M5 1219 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 ATP1A1-AS1Q5TC04 95 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 TMEM164Q5U3C3 297 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 ANKS6Q68DC2 871 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 BORAQ6PGQ7 559 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 RFX8Q6ZV50 586 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 Q6ZVL8 140 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 CYP4V2Q6ZWL3 525 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-220ENST00000569827 C17orf82Q86X59 251 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-220ENST00000569827 MCOLN2Q8IZK6 566 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 CACNA2D3Q8IZS8 1091 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.05□□□□□ -0.48
CAPN3-220ENST00000569827 NEK11Q8NG66 645 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 TMEM159Q96B96 161 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 DTD2Q96FN9 168 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 TAAR9Q96RI9 348 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 GSDMCQ9BYG8 508 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 PHPT1Q9NRX4 125 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-220ENST00000569827 ETNK2Q9NVF9 386 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 FANCLQ9NW38 375 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 AKAP7Q9P0M2 348 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-220ENST00000569827 PCYT1BQ9Y5K3 369 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-220ENST00000569827 GTF3C3Q9Y5Q9 886 aa12.05□□□□□ -0.48
CAPN3-220ENST00000569827 IGHV1OR21-1A0A087WYE8 117 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 CFAP69A5D8W1 941 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 EFCAB7A8K855 629 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-220ENST00000569827 NKX2-8O15522 239 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 RAD1O60671 282 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 HEXIM1O94992 359 aaKnown RBP12.04□□□□□ -0.48
CAPN3-220ENST00000569827 EML2O95834 649 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 HOXC4P09017 264 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-220ENST00000569827 THRAP10827 490 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 TCF4P15884 667 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 CD82P27701 267 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 MIPP30301 263 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 VIPR1P32241 457 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 ACTR1BP42025 376 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 ATP1A2P50993 1020 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 LIMK2P53671 638 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 ACTR1AP61163 376 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 KCNAB2Q13303 367 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 ZNF235Q14590 738 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 LBRQ14739 615 aaKnown RBP12.04□□□□□ -0.48
CAPN3-220ENST00000569827 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
CAPN3-220ENST00000569827 NRSN1Q8IZ57 195 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 ZNF564Q8TBZ8 553 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-220ENST00000569827 SEMA3CQ99985 751 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 TEX101Q9BY14 249 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 NOD2Q9HC29 1040 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 SLC39A1Q9NY26 324 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 KCNK4Q9NYG8 393 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 PRKAB1Q9Y478 270 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 SPTBP11277 2137 aa12.04□□□□□ -0.48
CAPN3-220ENST00000569827 HGSO14964 777 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-220ENST00000569827 AMPD1P23109 780 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 CSTF2P33240 577 aaKnown RBP eCLIP12.03□□□□□ -0.48
CAPN3-220ENST00000569827 MAPK9P45984 424 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 AIF1P55008 147 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 AP1S1P61966 158 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 POLR2LP62875 67 aaKnown RBP12.03□□□□□ -0.48
CAPN3-220ENST00000569827 UBXN1Q04323 297 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 IL10RBQ08334 325 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 MAMLD1Q13495 774 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 NR1D2Q14995 579 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 SMTNL2Q2TAL5 461 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 ERMARDQ5T6L9 678 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 TMCO4Q5TGY1 634 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 ACAD10Q6JQN1 1059 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 ENOX1Q8TC92 643 aaKnown RBP12.03□□□□□ -0.48
CAPN3-220ENST00000569827 SLC37A2Q8TED4 501 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 SCAMP4Q969E2 229 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 PSKH2Q96QS6 385 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 AGAP2Q99490 1192 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 APMAPQ9HDC9 416 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 CWC15Q9P013 229 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms