RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 ZFP36L1Q07352 338 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 NIPAL4Q0D2K0 466 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 SLC10A2Q12908 348 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 PAFAH1B3Q15102 231 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 C14orf28Q4W4Y0 310 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 ALKBH5Q6P6C2 394 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 TRIM74Q86UV6 250 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 SLITRK4Q8IW52 837 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 ZNF843Q8N446 348 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 ATL2Q8NHH9 583 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 ARRDC2Q8TBH0 407 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 GPBAR1Q8TDU6 330 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 SCG3Q8WXD2 468 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 MAML1Q92585 1016 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 TTC9Q92623 222 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 SCRN2Q96FV2 425 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 GFM1Q96RP9 751 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 AGAP2Q99490 1192 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 SEMA3CQ99985 751 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 CARS2Q9HA77 564 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 EPB41L5Q9HCM4 733 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 CD84Q9UIB8 345 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 APPL1Q9UKG1 709 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 PHTF1Q9UMS5 762 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 PPIL1Q9Y3C6 166 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 BZW2Q9Y6E2 419 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 PLD2O14939 933 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 B4GAT1O43505 415 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 FGF1P05230 155 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 ITGA2BP08514 1039 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 GLB1P16278 677 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 ITIH1P19827 911 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 RBMS1P29558 406 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 CASP14P31944 242 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 CCKBRP32239 447 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 GJC1P36383 396 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 GARSP41250 739 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 TMPRSS3P57727 454 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 GBE1Q04446 702 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 KRT81Q14533 505 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 TGIF1Q15583 401 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 CCDC122Q5T0U0 273 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 MARC1Q5VT66 337 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 LRRC66Q68CR7 880 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 ALG1LQ6GMV1 187 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 RAB11FIP2Q7L804 512 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 GAS2L3Q86XJ1 694 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 PAF1Q8N7H5 531 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 WDR48Q8TAF3 677 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 ZNF564Q8TBZ8 553 aaPredicted RBP13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 SNRNP27Q8WVK2 155 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 SCAMP4Q969E2 229 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 FAF2Q96CS3 445 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 XPO4Q9C0E2 1151 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 ABCG8Q9H221 673 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 SEMA6CQ9H3T2 930 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 RCOR3Q9P2K3 495 aaPredicted RBP13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 MOSPD1Q9UJG1 213 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 SUFUQ9UMX1 484 aa13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.82□□□□□ -0.22e-6■■■□□ 19
GTF3C1-211ENST00000569653 ASH1LQ9NR48 2969 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 TLN1Q9Y490 2541 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-211ENST00000569653 TK2O00142 265 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 HLA-DQB2P05538 268 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 MMP2P08253 660 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 CCNB1P14635 433 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 KELP23276 732 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 SLC5A2P31639 672 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 HNRNPH3P31942 346 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 GNPDA1P46926 289 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 INHBCP55103 352 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 PTSQ03393 145 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 TRIM14Q14142 442 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 ASTE1Q2TB18 679 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 ARMC12Q5T9G4 340 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 KIAA1614Q5VZ46 1190 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 ZNF574Q6ZN55 896 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 ZNF438Q7Z4V0 828 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 WDR24Q96S15 920 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 DPH1Q9BZG8 443 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 DPEP2Q9H4A9 486 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 RDH14Q9HBH5 336 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 TAAR2Q9P1P5 351 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 LRIT1Q9P2V4 623 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 SLC17A4Q9Y2C5 497 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 TMEM98Q9Y2Y6 226 aa13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 LUC7L2Q9Y383 392 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 FLNBO75369 2602 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-211ENST00000569653 BSNQ9UPA5 3926 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 A0A0J9YYE9 177 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 MYO1FO00160 1098 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 PSMD11O00231 422 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 PROSCO94903 275 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 ZIC2O95409 532 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 EML2O95834 649 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 TRBC1P01850 177 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 CYP2A6P11509 494 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 KRT10P13645 584 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms