RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 DTD2Q96FN9 168 aa15.73■□□□□ 0.11
HERPUD1-215ENST00000568676 SLC45A3Q96JT2 553 aa15.73■□□□□ 0.11
HERPUD1-215ENST00000568676 ZPBPQ9BS86 351 aa15.73■□□□□ 0.11
HERPUD1-215ENST00000568676 DHX35Q9H5Z1 703 aaKnown RBP15.73■□□□□ 0.11
HERPUD1-215ENST00000568676 SEPT11Q9NVA2 429 aaKnown RBP15.73■□□□□ 0.11
HERPUD1-215ENST00000568676 ANKMY1Q9P2S6 941 aa15.73■□□□□ 0.11
HERPUD1-215ENST00000568676 SUFUQ9UMX1 484 aa15.73■□□□□ 0.11
HERPUD1-215ENST00000568676 SLC17A4Q9Y2C5 497 aa15.73■□□□□ 0.11
HERPUD1-215ENST00000568676 DFFAO00273 331 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 HEXIM1O94992 359 aaKnown RBP15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 PYGLP06737 847 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 LIFP15018 202 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 ERCC2P18074 760 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 MAP4P27816 1152 aaKnown RBP15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 GNPDA1P46926 289 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 FASLGP48023 281 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 ARSDP51689 593 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 CTBSQ01459 385 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 DPTQ07507 201 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 UBAP2LQ14157 1087 aaKnown RBP15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 LBRQ14739 615 aaKnown RBP15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 KRT31Q15323 416 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 CNGA3Q16281 694 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 CDKAL1Q5VV42 579 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 SLC30A9Q6PML9 568 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 ARHGAP12Q8IWW6 846 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 MCOLN2Q8IZK6 566 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 BBS5Q8N3I7 341 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 NEK11Q8NG66 645 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 JPH3Q8WXH2 748 aaPredicted RBP15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 KIAA1143Q96AT1 154 aaPredicted RBP15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 SCARF2Q96GP6 870 aaPredicted RBP15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 AGPAT1Q99943 283 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 PARVAQ9NVD7 372 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 SLC39A1Q9NY26 324 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 KCNK4Q9NYG8 393 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 PDP2Q9P2J9 529 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 PHTF1Q9UMS5 762 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 SIK3Q9Y2K2 1263 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 B3GALT1Q9Y5Z6 326 aa15.72■□□□□ 0.11
HERPUD1-215ENST00000568676 SDK2Q58EX2 2172 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 EPHB6O15197 1021 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 PPM1DO15297 605 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 RAD1O60671 282 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 RNF8O76064 485 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 CPP00450 1065 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 ADCY8P40145 1251 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 KLK7P49862 253 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 MC1RQ01726 317 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 LRP8Q14114 963 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 ZNF235Q14590 738 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 CRTC2Q53ET0 693 aaPredicted RBP15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 ACAD10Q6JQN1 1059 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 PELI3Q8N2H9 469 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 ANKRD20A12PQ8NF67 263 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 OR10G6Q8NH81 332 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 SCRN2Q96FV2 425 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 AHCYL2Q96HN2 611 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 NUDCD1Q96RS6 583 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 NUP62CLQ9H1M0 184 aa15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 TRIT1Q9H3H1 467 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-215ENST00000568676 A8MX80 341 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 DUX1O43812 170 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 FUCA1P04066 466 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 ATP1A3P13637 1013 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 CR2P20023 1033 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 PSMA2P25787 234 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 AK4P27144 223 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 ACTR1BP42025 376 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 ACTR1AP61163 376 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 FOXK1P85037 733 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 RAET1GQ6H3X3 334 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 USP45Q70EL2 814 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 NLRP8Q86W28 1048 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 RAVER1Q8IY67 606 aaKnown RBP15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 NLGN4XQ8N0W4 816 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 NDUFAF2Q8N183 169 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 NLGN4YQ8NFZ3 816 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 C9orf43Q8TAL5 461 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 FNIP1Q8TF40 1166 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 PCMTD1Q96MG8 357 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 OR2M4Q96R27 311 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 ZMYND15Q9H091 742 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 EPN3Q9H201 632 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 ZWILCHQ9H900 591 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 GPN2Q9H9Y4 310 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 PILRAQ9UKJ1 303 aa15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 ARHGEF17Q96PE2 2063 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-215ENST00000568676 PRPSAP2O60256 369 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 FERP16591 822 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 ETV3P41162 512 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 NOP2P46087 812 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 OGDHQ02218 1023 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 SLC10A7Q0GE19 358 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 ABHD18Q0P651 414 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 MAMLD1Q13495 774 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 WDR74Q6RFH5 385 aaPredicted RBP15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 CEACAM20Q6UY09 585 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 ADAMTSL4Q6UY14 1074 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 FAM129CQ86XR2 697 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms