RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ZNF510Q9Y2H8 683 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 SH3BP1Q9Y3L3 701 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 UBA6A0AVT1 1052 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 F8W8V4 182 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 MT-CO1P00395 513 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 PENKP01210 267 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 LMNAP02545 664 aaKnown RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 JUNP05412 331 aaKnown RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 C8AP07357 584 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 HNRNPLP14866 589 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 SP100P23497 879 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 KCNC1P48547 511 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 KLF10Q13118 480 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 PDAP1Q13442 181 aaKnown RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 KHDC1Q4VXA5 237 aaKnown RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 ATXN7L2Q5T6C5 722 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 SCUBE1Q8IWY4 988 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 BBS7Q8IWZ6 715 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 CPXM2Q8N436 756 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 PHF21BQ96EK2 531 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 FAM161BQ96MY7 647 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 THTPAQ9BU02 230 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 CCDC28BQ9BUN5 200 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 EML4Q9HC35 981 aaKnown RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 IL23AQ9NPF7 189 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 HACD3Q9P035 362 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 TMEM233B4DJY2 109 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 FZD6O60353 706 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 NDUFS3O75489 264 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 ANP32DO95626 131 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 CXCL14O95715 111 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 ADH1AP07327 375 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 TPBGLP0DKB5 382 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 HTRA4P83105 476 aaPredicted RBP18.1■□□□□ 0.49
SMPD3-211ENST00000568373 NFKB2Q00653 900 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 PDCD2Q16342 344 aaPredicted RBP18.1■□□□□ 0.49
SMPD3-211ENST00000568373 RETSATQ6NUM9 610 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 FRMD7Q6ZUT3 714 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 ULK2Q8IYT8 1036 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 APCDD1Q8J025 514 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 TTC30BQ8N4P2 665 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 KLHL23Q8NBE8 558 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 WDR60Q8WVS4 1066 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 DCLRE1BQ9H816 532 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 GTSE1Q9NYZ3 720 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 FKBPLQ9UIM3 349 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 PCDHB9Q9Y5E1 797 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 TRAV19A0A0A6YYK7 116 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 A0A1W2PRU2 124 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 TRPC5OSA6NMA1 111 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 ZBBXA8MT70 800 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 K7ERQ8 282 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 STX7O15400 261 aaKnown RBP18.1■□□□□ 0.49
SMPD3-211ENST00000568373 IMPDH1P20839 514 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 AP1S1P61966 158 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 SULT2A1Q06520 285 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 GALNT1Q10472 559 aaPredicted RBP18.1■□□□□ 0.49
SMPD3-211ENST00000568373 ACSBG2Q5FVE4 666 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 MPP7Q5T2T1 576 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 L3HYPDHQ96EM0 354 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 CCDC68Q9H2F9 335 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 TAS2R13Q9NYV9 303 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 VPS9D1Q9Y2B5 631 aa18.1■□□□□ 0.49
SMPD3-211ENST00000568373 GBF1Q92538 1859 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 NRG2O14511 850 aaPredicted RBP18.09■□□□□ 0.49
SMPD3-211ENST00000568373 SRP72O76094 671 aaKnown RBP18.09■□□□□ 0.49
SMPD3-211ENST00000568373 RHOBTB1O94844 696 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 COX4I1P13073 169 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 FMO4P31512 558 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 MC4RP32245 332 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 EPHB1P54762 984 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 SLC25A3Q00325 362 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 PTPRRQ15256 657 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 MPPE1Q53F39 396 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 NECAB2Q7Z6G3 386 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 PIANPQ8IYJ0 282 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 ELMOD1Q8N336 334 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 KREMEN2Q8NCW0 462 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 RHEBL1Q8TAI7 183 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 CLP1Q92989 425 aaKnown RBP18.09■□□□□ 0.49
SMPD3-211ENST00000568373 USP13Q92995 863 aaPredicted RBP18.09■□□□□ 0.49
SMPD3-211ENST00000568373 ACDQ96AP0 544 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 FAM136AQ96C01 138 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 FAR2Q96K12 515 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 GCNAQ96QF7 691 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 TRMOQ9BU70 441 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 TM6SF2Q9BZW4 377 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 SYTL2Q9HCH5 934 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 MED16Q9Y2X0 877 aa18.09■□□□□ 0.49
SMPD3-211ENST00000568373 LOC100653049A0A140TA62 436 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 H7C0S8 307 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 SMIM24O75264 130 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 KRT34O76011 436 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 GJA1P17302 382 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 TTPAP49638 278 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 CDKN1CP49918 316 aaPredicted RBP18.08■□□□□ 0.49
SMPD3-211ENST00000568373 PSAPL1Q6NUJ1 521 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 RYBPQ8N488 228 aaPredicted RBP18.08■□□□□ 0.49
SMPD3-211ENST00000568373 CPSF7Q8N684 471 aaKnown RBP18.08■□□□□ 0.49
SMPD3-211ENST00000568373 MAELQ96JY0 434 aaKnown RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms