RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 KIF26BQ2KJY2 2108 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 ACACAQ13085 2346 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 ZNF106Q9H2Y7 1883 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 A0A0J9YYE9 177 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 PRSS38A1L453 326 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 LRRD1A4D1F6 860 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 CAPN8A6NHC0 703 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 C3orf70A6NLC5 250 aaPredicted RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 PPP1R12AO14974 1030 aaPredicted RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 RRP8O43159 456 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 TLX3O43711 291 aaPredicted RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 USP12O75317 370 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 CSO75390 466 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 DXOO77932 396 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 MAP3K6O95382 1288 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TRBC1P01850 177 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 HLA-DQB2P05538 268 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 PYGLP06737 847 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 CELA2BP08218 269 aaPredicted RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 PDHA1P08559 390 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 PNLIPP16233 465 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 ZFXP17010 805 aaPredicted RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 CTPS1P17812 591 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 ACTN2P35609 894 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 EIF2S3P41091 472 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 ETV3P41162 512 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 SLC1A1P43005 524 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 LSSP48449 732 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 EPHB1P54762 984 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 HADHBP55084 474 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 ERVPABLB-1P60509 514 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 RPL26P61254 145 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 GABREP78334 506 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 IFI35P80217 286 aaPredicted RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 CDK3Q00526 305 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 PPIDQ08752 370 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 SLC10A2Q12908 348 aaPredicted RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 TBX2Q13207 712 aaPredicted RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 PEX6Q13608 980 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 SPIDRQ14159 915 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TCEAL1Q15170 157 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TCEA2Q15560 299 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 ISXQ2M1V0 245 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 COL28A1Q2UY09 1125 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TBC1D25Q3MII6 688 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 ODF2Q5BJF6 829 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 PERM1Q5SV97 790 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 LRRC66Q68CR7 880 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 DENND2CQ68D51 928 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 SLC9A4Q6AI14 798 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 RAET1GQ6H3X3 334 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 C19orf48Q6RUI8 117 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 IGF2-ASQ6U949 168 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 LRRC69Q6ZNQ3 347 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 RBM44Q6ZP01 1051 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 ZNF765Q7L2R6 523 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 HSD11B1LQ7Z5J1 315 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TECPR1Q7Z6L1 1165 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TAF8Q7Z7C8 310 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TSPAN33Q86UF1 283 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 NLRP8Q86W28 1048 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 HEATR4Q86WZ0 1026 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 RHOT1Q8IXI2 618 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 CCDC13Q8IYE1 715 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 LSMEM2Q8N112 164 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 PLD5Q8N7P1 536 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 KYQ8NBH2 561 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 CCNYQ8ND76 341 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 FAM46DQ8NEK8 389 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 GPR156Q8NFN8 814 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 SNIP1Q8TAD8 396 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 KIAA1524Q8TCG1 905 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 HNRNPLLQ8WVV9 542 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 PIH1D2Q8WWB5 315 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 OR1E3Q8WZA6 343 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 RAPGEF5Q92565 580 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 FGF11Q92914 225 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 ZNF578Q96N58 590 aaPredicted RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 LYSMD1Q96S90 227 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 LGR4Q9BXB1 951 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TDRD1Q9BXT4 1180 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 MAK16Q9BXY0 300 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 TEX101Q9BY14 249 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TRIM5Q9C035 493 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TMEM168Q9H0V1 697 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 POLR1BQ9H9Y6 1135 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 PCDH9Q9HC56 1237 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 CYP4F12Q9HCS2 524 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 FGF22Q9HCT0 170 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 MRPL40Q9NQ50 206 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 SPTLC3Q9NUV7 552 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TRNAU1APQ9NX07 287 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 DDX56Q9NY93 547 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 SIRPGQ9P1W8 387 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 GULP1Q9UBP9 304 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 APPL1Q9UKG1 709 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 RPL26L1Q9UNX3 145 aaKnown RBP4.78□□□□□ -1.64
CLK3-219ENST00000567805 GPR34Q9UPC5 381 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 TTLL3Q9Y4R7 772 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms