RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 SLC17A9Q9BYT1 436 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 IRF2BPLQ9H1B7 796 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 TRABDQ9H4I3 376 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 ZFYVE1Q9HBF4 777 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 TM9SF3Q9HD45 589 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 MBNL1Q9NR56 388 aaKnown RBP8.16□□□□□ -1.1
CDH13-208ENST00000566333 HACD3Q9P035 362 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 DMTF1Q9Y222 760 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 ARL5AQ9Y689 179 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 SPEGQ15772 3267 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 CNOT1A5YKK6 2376 aaKnown RBP8.15□□□□□ -1.1
CDH13-208ENST00000566333 A0A1W2PR77 199 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 CTAGE15A4D2H0 777 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 POM121BA6NF01 834 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 MROH6A6NGR9 719 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 GOLGA8CPA6NN73 597 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 EFCAB8A8MWE9 144 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 GPR39O43194 453 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 BUD23O43709 281 aaKnown RBP8.15□□□□□ -1.1
CDH13-208ENST00000566333 AVILO75366 819 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 PAK4O96013 591 aaPredicted RBP8.15□□□□□ -1.1
CDH13-208ENST00000566333 CTAGE8P0CG41 777 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 BPIP17213 487 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 TPH1P17752 444 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 PSMA3P25788 255 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 NFKBIAP25963 317 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 HOXD12P35452 270 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 HMGCLP35914 325 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 NUDT1P36639 197 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 ADCY8P40145 1251 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 MPLP40238 635 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 SPINT3P49223 89 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 CLDN2P57739 230 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 DCDC1P59894 354 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 CRADDP78560 199 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 BNC1Q01954 994 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 DPTQ07507 201 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 ARHGEF7Q14155 803 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 PTPRCAPQ14761 206 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 POU6F1Q14863 301 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 ACOX1Q15067 660 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 TAF1AQ15573 450 aaPredicted RBP8.15□□□□□ -1.1
CDH13-208ENST00000566333 TRADDQ15628 312 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 WDR45BQ5MNZ6 344 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 TPRG1LQ5T0D9 272 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 DENND2CQ68D51 928 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 DUPD1Q68J44 220 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 HIBCHQ6NVY1 386 aaPredicted RBP8.15□□□□□ -1.1
CDH13-208ENST00000566333 ESRP1Q6NXG1 681 aaKnown RBP8.15□□□□□ -1.1
CDH13-208ENST00000566333 LRRC8BQ6P9F7 803 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 KYAT3Q6YP21 454 aaKnown RBP8.15□□□□□ -1.1
CDH13-208ENST00000566333 PPP1R21Q6ZMI0 780 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 ZNF765Q7L2R6 523 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 ABI3BPQ7Z7G0 1075 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 CTAGE6Q86UF2 777 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 HOOK3Q86VS8 718 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 SYT12Q8IV01 421 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 CTAGE4Q8IX94 777 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 PPIL6Q8IXY8 311 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 RAVER1Q8IY67 606 aaKnown RBP8.15□□□□□ -1.1
CDH13-208ENST00000566333 MPP5Q8N3R9 675 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 CEP112Q8N8E3 955 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 PLA2G15Q8NCC3 412 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 MCUQ8NE86 351 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 MNS1Q8NEH6 495 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 OR13C4Q8NGS5 318 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 SEC14L1Q92503 715 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 SCAMP4Q969E2 229 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 FUBP1Q96AE4 644 aaKnown RBP8.15□□□□□ -1.1
CDH13-208ENST00000566333 LRRC45Q96CN5 670 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 SNF8Q96H20 258 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 SERAC1Q96JX3 654 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 LENG8Q96PV6 779 aaPredicted RBP8.15□□□□□ -1.1
CDH13-208ENST00000566333 ERP44Q9BS26 406 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 LRRC1Q9BTT6 524 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 TRIM31Q9BZY9 425 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 SEMA4AQ9H3S1 761 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 SYBUQ9NX95 663 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.15□□□□□ -1.1
CDH13-208ENST00000566333 IL17CQ9P0M4 197 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 CD84Q9UIB8 345 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 KCTD3Q9Y597 815 aa8.15□□□□□ -1.1
CDH13-208ENST00000566333 DCHS1Q96JQ0 3298 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 ESYT3A0FGR9 886 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 FADS2P1A8MWK0 482 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 PATE3B3GLJ2 98 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 PRAMEF26H0Y7S4 382 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 GOLGA8MH3BSY2 632 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 BCAT2O15382 392 aaPredicted RBP8.14□□□□□ -1.11
CDH13-208ENST00000566333 LZTS3O60299 673 aaPredicted RBP8.14□□□□□ -1.11
CDH13-208ENST00000566333 BANF1O75531 89 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 LMNAP02545 664 aaKnown RBP8.14□□□□□ -1.11
CDH13-208ENST00000566333 PCCBP05166 539 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 MLNP12872 115 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 MGAT1P26572 445 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 AKT2P31751 481 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 CA5AP35218 305 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 TNNT3P45378 269 aaPredicted RBP8.14□□□□□ -1.11
CDH13-208ENST00000566333 LMAN1P49257 510 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 ITGA8P53708 1063 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms