RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 KLHL42Q9P2K6 505 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 POLG2Q9UHN1 485 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 OR2W1Q9Y3N9 320 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 DAAM1Q9Y4D1 1078 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 STON1Q9Y6Q2 735 aa2.16□□□□□ -2.06
SMG1-212ENST00000566328 ACKR2O00590 384 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 CLIC2O15247 247 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 ZNHIT1O43257 154 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 ANP32CO43423 234 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 KLK8O60259 260 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 CIDEAO60543 219 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 ZNF821O75541 412 aaPredicted RBP2.15□□□□□ -2.07
SMG1-212ENST00000566328 G6PDP11413 515 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 ZNF23P17027 643 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 PDIA3P30101 505 aaKnown RBP2.15□□□□□ -2.07
SMG1-212ENST00000566328 BDKRB2P30411 391 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 EIF2S3P41091 472 aaKnown RBP2.15□□□□□ -2.07
SMG1-212ENST00000566328 AARSP49588 968 aaKnown RBP eCLIP2.15□□□□□ -2.07
SMG1-212ENST00000566328 ICA1Q05084 483 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 GALNT1Q10472 559 aaPredicted RBP2.15□□□□□ -2.07
SMG1-212ENST00000566328 FOXO1Q12778 655 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 TMEM187Q14656 261 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 CCDC96Q2M329 555 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 CTXN3Q4LDR2 81 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 FAM53AQ6NSI3 398 aaPredicted RBP2.15□□□□□ -2.07
SMG1-212ENST00000566328 METTL2BQ6P1Q9 378 aaKnown RBP2.15□□□□□ -2.07
SMG1-212ENST00000566328 FAM171BQ6P995 826 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 DDHD1Q8NEL9 900 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 RAB40AQ8WXH6 277 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 PIGTQ969N2 578 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 METTL2AQ96IZ6 378 aaKnown RBP2.15□□□□□ -2.07
SMG1-212ENST00000566328 C8orf48Q96LL4 319 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 QRFPRQ96P65 431 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 SIN3AQ96ST3 1273 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 RMDN3Q96TC7 470 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 VGLL1Q99990 258 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 PLEKHA4Q9H4M7 779 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 CHODLQ9H9P2 273 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 MKKSQ9NPJ1 570 aaPredicted RBP2.15□□□□□ -2.07
SMG1-212ENST00000566328 NLRC4Q9NPP4 1024 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 BARHL2Q9NY43 387 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 TTC7AQ9ULT0 858 aaPredicted RBP2.15□□□□□ -2.07
SMG1-212ENST00000566328 ZHX2Q9Y6X8 837 aa2.15□□□□□ -2.07
SMG1-212ENST00000566328 CTAGE9A4FU28 777 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 SH2D7A6NKC9 451 aaPredicted RBP2.14□□□□□ -2.07
SMG1-212ENST00000566328 E9PQ18 207 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 CTAGE8P0CG41 777 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 MAOAP21397 527 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 DDIT3P35638 169 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 AMPHP49418 695 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 ISL1P61371 349 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 TUBB2AQ13885 445 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 XKR6Q5GH73 641 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 ANKRD54Q6NXT1 300 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 TRIM65Q6PJ69 517 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 RBMS3Q6XE24 437 aaKnown RBP2.14□□□□□ -2.07
SMG1-212ENST00000566328 MOB3CQ70IA8 216 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 LINGO2Q7L985 606 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 CTAGE4Q8IX94 777 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 RUBCNQ92622 972 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 MOCOSQ96EN8 888 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 TWNKQ96RR1 684 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 CD180Q99467 661 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 CMKLR1Q99788 373 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 CABLES2Q9BTV7 478 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 TUBB2BQ9BVA1 445 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 PCGF6Q9BYE7 350 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 ESRP2Q9H6T0 727 aaKnown RBP2.14□□□□□ -2.07
SMG1-212ENST00000566328 METTL14Q9HCE5 456 aaKnown RBP2.14□□□□□ -2.07
SMG1-212ENST00000566328 RASAL2Q9UJF2 1139 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 TP53TG3Q9ULZ0 132 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 DERAQ9Y315 318 aa2.14□□□□□ -2.07
SMG1-212ENST00000566328 SRSF10O75494 262 aaKnown RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 FAM106CPP0CH98 169 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 GATA1P15976 413 aaPredicted RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 POLR2CP19387 275 aaPredicted RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 AGAP20933 346 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 METAP2P50579 478 aaKnown RBP eCLIP2.13□□□□□ -2.07
SMG1-212ENST00000566328 CLDN2P57739 230 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 RPL24P83731 157 aaKnown RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 CHRNDQ07001 517 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 RIGQ13278 110 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 TCTN1Q2MV58 587 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 TECRLQ5HYJ1 363 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 GGNBP1Q5YKI7 109 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 IL31Q6EBC2 164 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 OR7E24Q6IFN5 339 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 C17orf99Q6UX52 265 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 ZNF704Q6ZNC4 412 aaPredicted RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 KRTAP5-5Q701N2 237 aaPredicted RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 FAM160B2Q86V87 743 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 ANKRD13AQ8IZ07 590 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 ZCCHC9Q8N567 271 aaKnown RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 NOC3LQ8WTT2 800 aaKnown RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 ARHGEF26Q96DR7 871 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 LINGO1Q96FE5 620 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 LTV1Q96GA3 475 aaPredicted RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 TWSG1Q9GZX9 223 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 LMAN2LQ9H0V9 348 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 SLC32A1Q9H598 525 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms