RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CDKN2AIPNLQ96HQ2 116 aa7.78□□□□□ -1.16
CDH1-208ENST00000565810 C9orf72Q96LT7 481 aa7.78□□□□□ -1.16
CDH1-208ENST00000565810 GPR174Q9BXC1 333 aa7.78□□□□□ -1.16
CDH1-208ENST00000565810 SLC17A9Q9BYT1 436 aa7.78□□□□□ -1.16
CDH1-208ENST00000565810 FAM83DQ9H4H8 585 aa7.78□□□□□ -1.16
CDH1-208ENST00000565810 BPIFA1Q9NP55 256 aa7.78□□□□□ -1.16
CDH1-208ENST00000565810 NLE1Q9NVX2 485 aaPredicted RBP7.78□□□□□ -1.16
CDH1-208ENST00000565810 IL17CQ9P0M4 197 aa7.78□□□□□ -1.16
CDH1-208ENST00000565810 GGT7Q9UJ14 662 aa7.78□□□□□ -1.16
CDH1-208ENST00000565810 TEX264Q9Y6I9 313 aa7.78□□□□□ -1.16
CDH1-208ENST00000565810 SLC30A1Q9Y6M5 507 aa7.78□□□□□ -1.16
CDH1-208ENST00000565810 CCDC78A2IDD5 438 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 GOLGA8CPA6NN73 597 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 PFDN6O15212 129 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 SPINT1O43278 529 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 BUD23O43709 281 aaKnown RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 BANF1O75531 89 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 RPP40O75818 363 aaKnown RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 RECQL5O94762 991 aaPredicted RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 FSBPO95073 299 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 PAK4O96013 591 aaPredicted RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 NMBRP28336 390 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 MAT2AP31153 395 aaKnown RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 CNR2P34972 360 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 PPARGP37231 505 aaPredicted RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 ETV3P41162 512 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 CCR5P51681 352 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 ZNF140P52738 457 aaPredicted RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 PMS2P54278 862 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 RPL6Q02878 288 aaKnown RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 CREB5Q02930 508 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 THOC5Q13769 683 aaKnown RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 CRYMQ14894 314 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 ZNF528Q3MIS6 628 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 SETMARQ53H47 684 aaPredicted RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 ALS2CLQ60I27 953 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 SEL1L3Q68CR1 1132 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 KIAA0895LQ68EN5 471 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 CES3Q6UWW8 571 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 C3orf62Q6ZUJ4 267 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 Q6ZVL8 140 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 TRMT10CQ7L0Y3 403 aaKnown RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 CYP2U1Q7Z449 544 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 HSD11B1LQ7Z5J1 315 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 TECPR1Q7Z6L1 1165 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 SDCCAG8Q86SQ7 713 aaPredicted RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 NLRP8Q86W28 1048 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 TRIM69Q86WT6 500 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 OTUD6BQ8N6M0 293 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.77□□□□□ -1.17
CDH1-208ENST00000565810 CADM4Q8NFZ8 388 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 OR13C4Q8NGS5 318 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 GSDMBQ8TAX9 411 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 CALML6Q8TD86 181 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 ASB12Q8WXK4 309 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 CDKL2Q92772 493 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 FOXJ1Q92949 421 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 HDAC10Q969S8 669 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.77□□□□□ -1.17
CDH1-208ENST00000565810 AP2M1Q96CW1 435 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 NUS1Q96E22 293 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 MFSD3Q96ES6 412 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 DTD2Q96FN9 168 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 DNAJC1Q96KC8 554 aaKnown RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 TBATAQ96M53 351 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 COQ10AQ96MF6 247 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 PLEKHG4BQ96PX9 1271 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 TTC1Q99614 292 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 ZSCAN5AQ9BUG6 496 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 SPATA16Q9BXB7 569 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 PCED1AQ9H1Q7 454 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 VPS37BQ9H9H4 285 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 CD93Q9NPY3 652 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 PPANQ9NQ55 473 aaKnown RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 C20orf96Q9NUD7 363 aaPredicted RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 INVSQ9Y283 1065 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 FNDC3AQ9Y2H6 1198 aaKnown RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 KCTD3Q9Y597 815 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.77□□□□□ -1.17
CDH1-208ENST00000565810 FAM169AQ9Y6X4 670 aa7.77□□□□□ -1.17
CDH1-208ENST00000565810 UQCRHLA0A096LP55 91 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 GLYATL1P3A0A0U1RQE8 302 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 A0A0U1RQS6 177 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 CCDC151A5D8V7 595 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 MEI4A8MW99 385 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 H7C0S8 307 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 SLC31A1O15431 190 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 GALR2O43603 387 aaPredicted RBP7.76□□□□□ -1.17
CDH1-208ENST00000565810 SRP72O76094 671 aaKnown RBP7.76□□□□□ -1.17
CDH1-208ENST00000565810 VAPBO95292 243 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 SLC34A2O95436 690 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 UQCRHP07919 91 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 FAM153BP0C7A2 387 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 MYBL2P10244 700 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 TDGF1P13385 188 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 BPIP17213 487 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 ITGALP20701 1170 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 AKT2P31751 481 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 MC4RP32245 332 aa7.76□□□□□ -1.17
CDH1-208ENST00000565810 STX2P32856 288 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms