RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RCVRNP35243 200 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 LAPTM5Q13571 262 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 VGLL4Q14135 290 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SPCS2Q15005 226 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 MOGQ16653 247 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 UGP2Q16851 508 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 WSCD1Q658N2 575 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 FAM117BQ6P1L5 589 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 DCLRE1AQ6PJP8 1040 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 LBX2Q6XYB7 198 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 AFG1LQ8WV93 481 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ITCHQ96J02 903 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SEZ6LQ9BYH1 1024 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 GTF2IRD1Q9UHL9 959 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 KCTD3Q9Y597 815 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 RAD54BQ9Y620 910 aa20.5■□□□□ 0.87
MAP1LC3B-206ENST00000564844 C19orf81C9J6K1 198 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 MOCS2O96007 188 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ZNF12P17014 697 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 GSK3BP49841 420 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ATP6AP1Q15904 470 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 AGAP9Q5VTM2 703 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 LRRC58Q96CX6 371 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PABPC5Q96DU9 382 aaKnown RBP20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 WDR6Q9NNW5 1121 aaKnown RBP20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SEMA4BQ9NPR2 832 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TMEM30AQ9NV96 361 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 FXYD1O00168 92 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 KDM1AO60341 852 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 MAGP20916 626 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ACADSBP45954 432 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PAGE3Q5JUK9 113 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 FAM45BPQ6NSW5 357 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ZNF354CQ86Y25 554 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 MFSD2AQ8NA29 543 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 FAM45AQ8TCE6 357 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 KCTD14Q9BQ13 255 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CDH7Q9ULB5 785 aa20.49■□□□□ 0.87
MAP1LC3B-206ENST00000564844 GFAPP14136 432 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TCF3P15923 654 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 EDNRBP24530 442 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CDKN2DP55273 166 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 LIPEQ05469 1076 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 EXOC8Q8IYI6 725 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PTGR2Q8N8N7 351 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TRPV3Q8NET8 790 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TOP1MTQ969P6 601 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 C12orf42Q96LP6 360 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 NANOGQ9H9S0 305 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 INTS7Q9NVH2 962 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 RCOR3Q9P2K3 495 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SARDHQ9UL12 918 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PHIPQ8WWQ0 1821 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 UBXN8O00124 270 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 LGALS2P05162 132 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 LTA4HP09960 611 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 FSHRP23945 695 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PSMD8P48556 350 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 KCTD2Q14681 263 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 AAK1Q2M2I8 961 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PAN2Q504Q3 1202 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CLEC20AQ6ZU45 233 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SDCCAG3Q96C92 435 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 KLRG1Q96E93 195 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 HSFY1Q96LI6 401 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CCDC138Q96M89 665 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 KLHL25Q9H0H3 589 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ALG2Q9H553 416 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SMURF2Q9HAU4 748 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 FNDC3AQ9Y2H6 1198 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 WDR37Q9Y2I8 494 aa20.48■□□□□ 0.87
MAP1LC3B-206ENST00000564844 DAB1O75553 588 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PIRTP0C851 137 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 HK2P52789 917 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 MEP1AQ16819 746 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TIGD2Q4W5G0 525 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 R3HCC1LQ7Z5L2 792 aaKnown RBP20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SAPCD2Q86UD0 394 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 RSPH1Q8WYR4 309 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 MYRFLQ96LU7 910 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SLC30A3Q99726 388 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 COLEC11Q9BWP8 271 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CHID1Q9BWS9 393 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 RBM22Q9NW64 420 aaKnown RBP eCLIP20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ERI2A8K979 691 aaKnown RBP20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 RASAL1O95294 804 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 NPR3P17342 541 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 HADHAP40939 763 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PPIL2Q13356 520 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 INTS11Q5TA45 600 aaKnown RBP20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 DENND5AQ6IQ26 1287 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PAQR9Q6ZVX9 377 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ABI1Q8IZP0 508 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TTC39CQ8N584 583 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TWIST2Q8WVJ9 160 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PTERQ96BW5 349 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 DUSP16Q9BY84 665 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TUBA8Q9NY65 449 aaPredicted RBP20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ERGIC3Q9Y282 383 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TPD52L2O43399 206 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms