RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 A0A1B0GVM2 712 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 CDRT15L2A8MXV6 281 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 J3KR12 359 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 VCYO14598 125 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 TIMM23O14925 209 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 ASAP2O43150 1006 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 JRKO75564 520 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 VNN2O95498 520 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 FTCDO95954 541 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 SRPRAP08240 638 aaKnown RBP4.76□□□□□ -1.65
LINC00560-201ENST00000564593 LMO1P25800 156 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 EIF2S3P41091 472 aaKnown RBP4.76□□□□□ -1.65
LINC00560-201ENST00000564593 EIF2DP41214 584 aaKnown RBP4.76□□□□□ -1.65
LINC00560-201ENST00000564593 METAP2P50579 478 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC00560-201ENST00000564593 ZBED6P86452 979 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 ACSM2AQ08AH3 577 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 LRIF1Q5T3J3 769 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 GGNBP1Q5YKI7 109 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 ACSM2BQ68CK6 577 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 SIGIRRQ6IA17 410 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 CRELD2Q6UXH1 353 aaPredicted RBP4.76□□□□□ -1.65
LINC00560-201ENST00000564593 B3GNT6Q6ZMB0 384 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 CLEC17AQ6ZS10 378 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 AADATQ8N5Z0 425 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 OR2A14Q96R47 310 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 PCGF1Q9BSM1 259 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 NKIRAS2Q9NYR9 191 aa4.76□□□□□ -1.65
LINC00560-201ENST00000564593 ZCCHC6Q5VYS8 1495 aaKnown RBP4.76□□□□□ -1.65
LINC00560-201ENST00000564593 A0A1B0GVT2 93 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 H3BQ06 376 aaPredicted RBP4.75□□□□□ -1.65
LINC00560-201ENST00000564593 TNFRSF13BO14836 293 aaPredicted RBP4.75□□□□□ -1.65
LINC00560-201ENST00000564593 RGS14O43566 566 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 SPRY3O43610 288 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 TPPPO94811 219 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 SOX30O94993 753 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 G6PDP11413 515 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 HOXB2P14652 356 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 SAT1P21673 171 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 HOXA13P31271 388 aaPredicted RBP4.75□□□□□ -1.65
LINC00560-201ENST00000564593 KRT20P35900 424 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 RPL3P39023 403 aaKnown RBP4.75□□□□□ -1.65
LINC00560-201ENST00000564593 RFX2P48378 723 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 COMPP49747 757 aaPredicted RBP4.75□□□□□ -1.65
LINC00560-201ENST00000564593 MFAP4P55083 255 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 GPS2Q13227 327 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 SOWAHCQ53LP3 525 aaPredicted RBP4.75□□□□□ -1.65
LINC00560-201ENST00000564593 PMS2CLQ68D20 193 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 TMCO3Q6UWJ1 677 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 DPPA4Q7L190 304 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 IRF2BP2Q7Z5L9 587 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 POC5Q8NA72 575 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 HJURPQ8NCD3 748 aaPredicted RBP4.75□□□□□ -1.65
LINC00560-201ENST00000564593 ACOX2Q99424 681 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 RBM38Q9H0Z9 239 aaKnown RBP4.75□□□□□ -1.65
LINC00560-201ENST00000564593 PPP1R3EQ9H7J1 279 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 CWC15Q9P013 229 aaKnown RBP4.75□□□□□ -1.65
LINC00560-201ENST00000564593 INSL5Q9Y5Q6 135 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 TTC3P53804 2025 aa4.75□□□□□ -1.65
LINC00560-201ENST00000564593 COL3A1P02461 1466 aaPredicted RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 H3BNX3 289 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 CTDSP2O14595 271 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 WNT9BO14905 357 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 HSPA12AO43301 675 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 ZIC3O60481 467 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 GPC4O75487 556 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 PGM3O95394 542 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 MAOAP21397 527 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 HNRNPH1P31943 449 aaKnown RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 NNMTP40261 264 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 PRCPP42785 496 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 NR4A2P43354 598 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 SLC15A1P46059 708 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 ZNF81P51508 661 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 NUDT6P53370 316 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 TAS2R40P59535 323 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 PSMC6P62333 389 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 IFI35P80217 286 aaPredicted RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 LRMPQ12912 555 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 BECN1Q14457 450 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 TWIST1Q15672 202 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 EIF2S3LQ2VIR3 472 aaKnown RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 PCGF3Q3KNV8 242 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 TYW3Q6IPR3 259 aaKnown RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 CFAP77Q6ZQR2 320 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 LSMEM1Q8N8F7 131 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 OR8K5Q8NH50 307 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 HMCESQ96FZ2 354 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 CCDC34Q96HJ3 373 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 LRFN5Q96NI6 719 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 TEX12Q9BXU0 123 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 PDE7BQ9NP56 450 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 CHORDC1Q9UHD1 332 aaPredicted RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 TTC7AQ9ULT0 858 aaPredicted RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 FZD10Q9ULW2 581 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 CDC14AQ9UNH5 594 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 PTGDR2Q9Y5Y4 395 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 SQORQ9Y6N5 450 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 CKAP5Q14008 2032 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 ZNF521Q96K83 1311 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 OR6C75A6NL08 312 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms