RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 ZNF829Q3KNS6 432 aaPredicted RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 KRTAP21-3Q3LHN1 58 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CCDC14Q49A88 953 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 RARS2Q5T160 578 aaKnown RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 C1orf146Q5VVC0 180 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ATG16L1Q676U5 607 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 KRT39Q6A163 491 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ZNF788Q6ZQV5 615 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 NEK10Q6ZWH5 1172 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 OTUD6AQ7L8S5 288 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 C1QL2Q7Z5L3 287 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PEG10Q86TG7 708 aaKnown RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 RHOT1Q8IXI2 618 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 MAGEB6Q8N7X4 407 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PPM1NQ8N819 430 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PDPRQ8NCN5 879 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 RBM15BQ8NDT2 890 aaKnown RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 LNX1Q8TBB1 728 aaPredicted RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 LRRC15Q8TF66 581 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CHPT1Q8WUD6 406 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TMEM125Q96AQ2 219 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 NMD3Q96D46 503 aaKnown RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 DNAJC19Q96DA6 116 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ANKRD36BP1Q96IX9 119 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PANX3Q96QZ0 392 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 VKORC1Q9BQB6 163 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TSSK1BQ9BXA7 367 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 FRMD8P1Q9BZ68 369 aaPredicted RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 IMPG2Q9BZV3 1241 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 MANSC1Q9H8J5 431 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 C10orf88Q9H8K7 445 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ARMT1Q9H993 441 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PTBP2Q9UKA9 531 aaKnown RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ITGA11Q9UKX5 1188 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 RABGAP1Q9Y3P9 1069 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ENTPD2Q9Y5L3 495 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 SNX9Q9Y5X1 595 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ALG6Q9Y672 507 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 KCPQ6ZWJ8 1503 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TRPM3Q9HCF6 1732 aaPredicted RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ASTN2O75129 1339 aaPredicted RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ZNF335Q9H4Z2 1342 aaPredicted RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 LAMB2P55268 1798 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 RBBP6Q7Z6E9 1792 aaKnown RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 RGPD5Q99666 1765 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PRAMEF33A0A0G2JMD5 474 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CFAP69A5D8W1 941 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TRIM64BA6NI03 449 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TRIM64CA6NLI5 447 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ADM5C9JUS6 153 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 FCHO1O14526 889 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PMM2O15305 246 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TP73O15350 636 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 EIF3DO15371 548 aaKnown RBP eCLIP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 YY2O15391 372 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ITM2AO43736 263 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PRAMEF10O60809 474 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CYP1A2P05177 515 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CDH2P19022 906 aaPredicted RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CA4P22748 312 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PAX3P23760 479 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TCF7P36402 384 aaPredicted RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 MAGEA4P43358 317 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TMED10P49755 219 aaKnown RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 HNRNPFP52597 415 aaKnown RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ITGA8P53708 1063 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 FOLH1Q04609 750 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 MSLNQ13421 630 aaPredicted RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TRPC3Q13507 836 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CTTNQ14247 550 aaKnown RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 MORF4L2Q15014 288 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TMED2Q15363 201 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CCNG2Q16589 344 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 C3orf36Q3SXR2 165 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CERKLQ49MI3 558 aaPredicted RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 NADK2Q4G0N4 442 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TMEM63BQ5T3F8 832 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 RNF219Q5W0B1 726 aaPredicted RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PGM2L1Q6PCE3 622 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PCGF5Q86SE9 256 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TPH2Q8IWU9 490 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 COLGALT2Q8IYK4 626 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CCDC33Q8N5R6 958 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 DDHD1Q8NEL9 900 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 GDPD5Q8WTR4 605 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 STARD8Q92502 1023 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CCDC138Q96M89 665 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 UROC1Q96N76 676 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 PSD2Q9BQI7 771 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 TMEM120AQ9BXJ8 343 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 NUF2Q9BZD4 464 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 NACA2Q9H009 215 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 GLT8D2Q9H1C3 349 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 DHX33Q9H6R0 707 aaKnown RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 MOV10Q9HCE1 1003 aaKnown RBP3.58□□□□□ -1.84
LINC01416-201ENST00000563553 MAGEE1Q9HCI5 957 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 CD209Q9NNX6 404 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ATAD3AQ9NVI7 634 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 ARHGEF38Q9NXL2 777 aa3.58□□□□□ -1.84
LINC01416-201ENST00000563553 MCM9Q9NXL9 1143 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms