RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 DEFB133Q30KQ1 61 aa28.26■■■□□ 2.11
NME3-203ENST00000563367 HS1BP3Q53T59 392 aa28.26■■■□□ 2.11
NME3-203ENST00000563367 SYCE1Q8N0S2 351 aa28.26■■■□□ 2.11
NME3-203ENST00000563367 PDXPQ96GD0 296 aa28.26■■■□□ 2.11
NME3-203ENST00000563367 ABCG8Q9H221 673 aa28.26■■■□□ 2.11
NME3-203ENST00000563367 WDR26Q9H7D7 661 aa28.26■■■□□ 2.11
NME3-203ENST00000563367 U3KQA8 63 aa28.26■■■□□ 2.11
NME3-203ENST00000563367 HACD1B0YJ81 288 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 DDX3YO15523 660 aaKnown RBP28.25■■■□□ 2.11
NME3-203ENST00000563367 MTSS1O43312 755 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 RASGRP1O95267 797 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 ACP1P24666 158 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 OTUD4Q01804 1114 aaKnown RBP28.25■■■□□ 2.11
NME3-203ENST00000563367 XRCC4Q13426 336 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 TCEA2Q15560 299 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 TMPRSS7Q7RTY8 843 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 MARCH9Q86YJ5 346 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 ZNF567Q8N184 647 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 FAM181AQ8N9Y4 354 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 ACTL9Q8TC94 416 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 HTR3CQ8WXA8 447 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 OR1E3Q8WZA6 343 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 MLPHQ9BV36 600 aaPredicted RBP28.25■■■□□ 2.11
NME3-203ENST00000563367 DUSP23Q9BVJ7 150 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 TEX101Q9BY14 249 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 ADGRE3Q9BY15 652 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 FGF22Q9HCT0 170 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 MRPL40Q9NQ50 206 aaKnown RBP28.25■■■□□ 2.11
NME3-203ENST00000563367 UBP1Q9NZI7 540 aa28.25■■■□□ 2.11
NME3-203ENST00000563367 GOLGA6CA6NDK9 693 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 GOLGA6BA6NDN3 693 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 C1QTNF9BB2RNN3 333 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 ARHGAP6O43182 974 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 C1QTNF9P0C862 333 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 GOLGA6DP0CG33 693 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 CKMT1AP12532 417 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 NFKB1P19838 968 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 BLKP51451 505 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 DAB2P98082 770 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 DPTQ07507 201 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 SLC14A2Q15849 920 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 CCDC181Q5TID7 509 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 HEATR4Q86WZ0 1026 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 OR56A4Q8NGH8 313 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 ATL2Q8NHH9 583 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 GATA6Q92908 595 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 SCAMP4Q969E2 229 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 FAM118BQ9BPY3 351 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 GOLGA6AQ9NYA3 693 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 DNPEPQ9ULA0 475 aa28.24■■■□□ 2.11
NME3-203ENST00000563367 ARHGEF17Q96PE2 2063 aaPredicted RBP28.23■■■□□ 2.11
NME3-203ENST00000563367 RP1P56715 2156 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 C1orf232A0A0U1RR37 186 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 LMO7DNF2Z398 122 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 H7C0C1 242 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 TPP1O14773 563 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 PMPCBO75439 489 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 SOD1P00441 154 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 RBL1P28749 1068 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 ATP5OP48047 213 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 CLDN6P56747 220 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 SMAD1Q15797 465 aaKnown RBP28.23■■■□□ 2.11
NME3-203ENST00000563367 RAET1GQ6H3X3 334 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 CCNI2Q6ZMN8 369 aaPredicted RBP28.23■■■□□ 2.11
NME3-203ENST00000563367 LRRC8AQ8IWT6 810 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 RNF10Q8N5U6 811 aaKnown RBP28.23■■■□□ 2.11
NME3-203ENST00000563367 CCDC112Q8NEF3 446 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 AP2M1Q96CW1 435 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 KLHL8Q9P2G9 620 aaPredicted RBP28.23■■■□□ 2.11
NME3-203ENST00000563367 GUCA1BQ9UMX6 200 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 DGKBQ9Y6T7 804 aa28.23■■■□□ 2.11
NME3-203ENST00000563367 MIF4GDA9UHW6 222 aaKnown RBP28.22■■■□□ 2.11
NME3-203ENST00000563367 F5H423 210 aaPredicted RBP28.22■■■□□ 2.11
NME3-203ENST00000563367 YY2O15391 372 aa28.22■■■□□ 2.11
NME3-203ENST00000563367 TNFP01375 233 aa28.22■■■□□ 2.11
NME3-203ENST00000563367 MYCLP1P12525 358 aaPredicted RBP28.22■■■□□ 2.11
NME3-203ENST00000563367 CDK18Q07002 472 aa28.22■■■□□ 2.11
NME3-203ENST00000563367 ZCCHC8Q6NZY4 707 aaKnown RBP28.22■■■□□ 2.11
NME3-203ENST00000563367 PID1Q7Z2X4 250 aa28.22■■■□□ 2.11
NME3-203ENST00000563367 UBL4BQ8N7F7 174 aa28.22■■■□□ 2.11
NME3-203ENST00000563367 HES6Q96HZ4 224 aa28.22■■■□□ 2.11
NME3-203ENST00000563367 AGAP2Q99490 1192 aa28.22■■■□□ 2.11
NME3-203ENST00000563367 PHPT1Q9NRX4 125 aaPredicted RBP28.22■■■□□ 2.11
NME3-203ENST00000563367 SCN8AQ9UQD0 1980 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 FAM149AA5PLN7 773 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 TNFRSF10CO14798 259 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 TJP3O95049 919 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 PIRTP0C851 137 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 CTSEP14091 401 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 KELP23276 732 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 TEAD1P28347 426 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 CETN2P41208 172 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 CDK3Q00526 305 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 ILKQ13418 452 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 KDELC1Q6UW63 502 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 ZNF765Q7L2R6 523 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 LYSMD3Q7Z3D4 306 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 NRSN1Q8IZ57 195 aa28.21■■■□□ 2.11
NME3-203ENST00000563367 FSTL5Q8N475 847 aaPredicted RBP28.21■■■□□ 2.11
NME3-203ENST00000563367 EID2BQ96D98 161 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms