RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 MCCC1Q96RQ3 725 aaPredicted RBP15.73■□□□□ 0.11
CLK3-211ENST00000563297 FRMD8Q9BZ67 464 aaPredicted RBP15.73■□□□□ 0.11
CLK3-211ENST00000563297 THAP2Q9H0W7 228 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 TRNAU1APQ9NX07 287 aaKnown RBP15.73■□□□□ 0.11
CLK3-211ENST00000563297 PISDQ9UG56 409 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 LOXL2Q9Y4K0 774 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 ST14Q9Y5Y6 855 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 A0A0U1RQS6 177 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 PSMD11O00231 422 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 AGRPO00253 132 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 PDHA1P08559 390 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 ITIH1P19827 911 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 NFKBIAP25963 317 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 AK4P27144 223 aaPredicted RBP15.72■□□□□ 0.11
CLK3-211ENST00000563297 TEAD1P28347 426 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 SERPINB6P35237 376 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 ETV5P41161 510 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 POLD2P49005 469 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 MAZP56270 477 aaKnown RBP15.72■□□□□ 0.11
CLK3-211ENST00000563297 CDK3Q00526 305 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 SLC25A11Q02978 314 aaKnown RBP15.72■□□□□ 0.11
CLK3-211ENST00000563297 MMRN1Q13201 1228 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 TDRD12Q587J7 1177 aaKnown RBP15.72■□□□□ 0.11
CLK3-211ENST00000563297 ARMC12Q5T9G4 340 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 TECPR1Q7Z6L1 1165 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 SLITRK4Q8IW52 837 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 ATPAF2Q8N5M1 289 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 TEX26Q8N6G2 289 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 KIAA1524Q8TCG1 905 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 ZDHHC1Q8WTX9 485 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 NSMCE1Q8WV22 266 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 TMEM159Q96B96 161 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 GSDMCQ9BYG8 508 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 SEMA6CQ9H3T2 930 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 SUDS3Q9H7L9 328 aaPredicted RBP15.72■□□□□ 0.11
CLK3-211ENST00000563297 NT5MQ9NPB1 228 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 TAAR2Q9P1P5 351 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 IP6K2Q9UHH9 426 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 SUFUQ9UMX1 484 aa15.72■□□□□ 0.11
CLK3-211ENST00000563297 BZW2Q9Y6E2 419 aaKnown RBP15.72■□□□□ 0.11
CLK3-211ENST00000563297 CYP1A2P05177 515 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 CTPS1P17812 591 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 PBX1P40424 430 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 GNPDA1P46926 289 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 OR1D5P58170 312 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 DPTQ07507 201 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 ILF3Q12906 894 aaKnown RBP eCLIP15.71■□□□□ 0.11
CLK3-211ENST00000563297 CAVIN1Q6NZI2 390 aaKnown RBP15.71■□□□□ 0.11
CLK3-211ENST00000563297 ZNF574Q6ZN55 896 aaPredicted RBP15.71■□□□□ 0.11
CLK3-211ENST00000563297 RFLNAQ6ZTI6 216 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 USP53Q70EK8 1073 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 ZNF438Q7Z4V0 828 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 PIM3Q86V86 326 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 LRRC49Q8IUZ0 686 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 FAM71BQ8TC56 605 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 SYN2Q92777 582 aaPredicted RBP15.71■□□□□ 0.11
CLK3-211ENST00000563297 SMIM14Q96QK8 99 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 CMKLR1Q99788 373 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 SEMA3CQ99985 751 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 FUCA2Q9BTY2 467 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 NUP85Q9BW27 656 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 ABCG8Q9H221 673 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 RDH14Q9HBH5 336 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 WDR70Q9NW82 654 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 ANAPC7Q9UJX3 599 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 SLC17A4Q9Y2C5 497 aa15.71■□□□□ 0.11
CLK3-211ENST00000563297 FLNBO75369 2602 aaKnown RBP15.7■□□□□ 0.1
CLK3-211ENST00000563297 A0A087X0T9 212 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 A0A1W2PQJ5 194 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 GOLGA6CA6NDK9 693 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 GOLGA6BA6NDN3 693 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 FZD6O60353 706 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 ECEL1O95672 775 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 CPNE6O95741 557 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 SOD1P00441 154 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 CD48P09326 243 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 FAM228BP0C875 321 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 GOLGA6DP0CG33 693 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 ALDH4A1P30038 563 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 ADCY8P40145 1251 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 ARSEP51690 589 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 CTBSQ01459 385 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 PTSQ03393 145 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 SRSF6Q13247 344 aaKnown RBP15.7■□□□□ 0.1
CLK3-211ENST00000563297 IHHQ14623 411 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 C16orf72Q14CZ0 275 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 AMZ1Q400G9 498 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 ATP13A4Q4VNC1 1196 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 PHF19Q5T6S3 580 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 RAET1GQ6H3X3 334 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 USP45Q70EL2 814 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 NAGSQ8N159 534 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 PATE1Q8WXA2 126 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 USP7Q93009 1102 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 MED8Q96G25 268 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 SCARF2Q96GP6 870 aaPredicted RBP15.7■□□□□ 0.1
CLK3-211ENST00000563297 GOLGA6AQ9NYA3 693 aa15.7■□□□□ 0.1
CLK3-211ENST00000563297 RCOR3Q9P2K3 495 aaPredicted RBP15.7■□□□□ 0.1
CLK3-211ENST00000563297 ZFC3H1O60293 1989 aaKnown RBP15.69■□□□□ 0.1
CLK3-211ENST00000563297 PRAMEF33A0A0G2JMD5 474 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms