RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 KDM1BQ8NB78 822 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 TNFRSF12AQ9NP84 129 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 NCKIPSDQ9NZQ3 722 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 NKX1-2Q9UD57 310 aaPredicted RBP19.1■□□□□ 0.65
SMPD3-203ENST00000563226 CORO1CQ9ULV4 474 aaPredicted RBP19.1■□□□□ 0.65
SMPD3-203ENST00000563226 SSX2IPQ9Y2D8 614 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 MTCL1Q9Y4B5 1905 aaKnown RBP19.1■□□□□ 0.65
SMPD3-203ENST00000563226 CHD7Q9P2D1 2997 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 TRAV19A0A0A6YYK7 116 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 LEFTY2O00292 366 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 CD1EP15812 388 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 ZNF37AP17032 561 aaPredicted RBP19.09■□□□□ 0.65
SMPD3-203ENST00000563226 CTPS1P17812 591 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 FMO4P31512 558 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 CD70P32970 193 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 ASPHQ12797 758 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 PDCD2Q16342 344 aaPredicted RBP19.09■□□□□ 0.65
SMPD3-203ENST00000563226 SETMARQ53H47 684 aaPredicted RBP19.09■□□□□ 0.65
SMPD3-203ENST00000563226 PLPP4Q5VZY2 271 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 CCDC149Q6ZUS6 474 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 RIN3Q8TB24 985 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 INTS10Q9NVR2 710 aaKnown RBP19.09■□□□□ 0.65
SMPD3-203ENST00000563226 CCL26Q9Y258 94 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.09■□□□□ 0.65
SMPD3-203ENST00000563226 H3BMM5 538 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 GPR39O43194 453 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 ALPIP09923 528 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 GKP32189 559 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 MC4RP32245 332 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 CPOXP36551 454 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 PGM1P36871 562 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 SLC26A3P40879 764 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 PEX6Q13608 980 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 LSM12Q3MHD2 195 aaKnown RBP19.09■□□□□ 0.65
SMPD3-203ENST00000563226 WASHC2DQ5SRD0 308 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 CAMK1DQ8IU85 385 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 CPXM2Q8N436 756 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 RYBPQ8N488 228 aaPredicted RBP19.09■□□□□ 0.65
SMPD3-203ENST00000563226 EID2BQ96D98 161 aa19.09■□□□□ 0.65
SMPD3-203ENST00000563226 EVLQ9UI08 416 aaPredicted RBP19.09■□□□□ 0.65
SMPD3-203ENST00000563226 FGBP02675 491 aa19.08■□□□□ 0.64
SMPD3-203ENST00000563226 SP100P23497 879 aaPredicted RBP19.08■□□□□ 0.64
SMPD3-203ENST00000563226 CCND1P24385 295 aa19.08■□□□□ 0.64
SMPD3-203ENST00000563226 SH2D4BQ5SQS7 431 aa19.08■□□□□ 0.64
SMPD3-203ENST00000563226 BADQ92934 168 aa19.08■□□□□ 0.64
SMPD3-203ENST00000563226 EXT2Q93063 718 aa19.08■□□□□ 0.64
SMPD3-203ENST00000563226 TCEAL4Q96EI5 215 aa19.08■□□□□ 0.64
SMPD3-203ENST00000563226 CLPTM1LQ96KA5 538 aa19.08■□□□□ 0.64
SMPD3-203ENST00000563226 C2orf49Q9BVC5 232 aaPredicted RBP19.08■□□□□ 0.64
SMPD3-203ENST00000563226 ASAH2Q9NR71 780 aa19.08■□□□□ 0.64
SMPD3-203ENST00000563226 GTSE1Q9NYZ3 720 aa19.08■□□□□ 0.64
SMPD3-203ENST00000563226 GALPQ9UBC7 116 aa19.08■□□□□ 0.64
SMPD3-203ENST00000563226 INTS6Q9UL03 887 aaKnown RBP19.08■□□□□ 0.64
SMPD3-203ENST00000563226 FAM50BQ9Y247 325 aa19.08■□□□□ 0.64
SMPD3-203ENST00000563226 OR1I1O60431 355 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 RHOBTB1O94844 696 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 SULT2A1Q06520 285 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 PDAP1Q13442 181 aaKnown RBP19.07■□□□□ 0.64
SMPD3-203ENST00000563226 OR4D1Q15615 310 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 SPRED2Q7Z698 418 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 WDR60Q8WVS4 1066 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 CNDP1Q96KN2 507 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 STK39Q9UEW8 545 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 G3BP2Q9UN86 482 aaKnown RBP19.07■□□□□ 0.64
SMPD3-203ENST00000563226 ZNF711Q9Y462 761 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 INSL6Q9Y581 213 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 ALPK3Q96L96 1907 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 MYO7AQ13402 2215 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 PDE4DIPQ5VU43 2346 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 STX7O15400 261 aaKnown RBP19.07■□□□□ 0.64
SMPD3-203ENST00000563226 NDUFS3O75489 264 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 RFPL2O75678 378 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 GLUD1P00367 558 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 HK2P52789 917 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 MXRA7P84157 204 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 SLC25A3Q00325 362 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 KLF10Q13118 480 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 KPNB1Q14974 876 aaKnown RBP19.07■□□□□ 0.64
SMPD3-203ENST00000563226 NAA25Q14CX7 972 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 MPPE1Q53F39 396 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 TMEM198Q66K66 360 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 ELMOD1Q8N336 334 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 SHKBP1Q8TBC3 707 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 CCDC126Q96EE4 140 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 MYO19Q96H55 970 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 BIRC8Q96P09 236 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 GCNAQ96QF7 691 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 TNKS2Q9H2K2 1166 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 MMADHCQ9H3L0 296 aaPredicted RBP19.07■□□□□ 0.64
SMPD3-203ENST00000563226 GSTO2Q9H4Y5 243 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 POPDC3Q9HBV1 291 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 VTI1BQ9UEU0 232 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 IKZF3Q9UKT9 509 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 FIS1Q9Y3D6 152 aa19.07■□□□□ 0.64
SMPD3-203ENST00000563226 ZNF821O75541 412 aaPredicted RBP19.06■□□□□ 0.64
SMPD3-203ENST00000563226 SRP72O76094 671 aaKnown RBP19.06■□□□□ 0.64
SMPD3-203ENST00000563226 PGLSO95336 258 aa19.06■□□□□ 0.64
SMPD3-203ENST00000563226 HOXB8P17481 243 aaPredicted RBP19.06■□□□□ 0.64
SMPD3-203ENST00000563226 CTSOP43234 321 aaPredicted RBP19.06■□□□□ 0.64
SMPD3-203ENST00000563226 EPHB1P54762 984 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms