RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 RABEPKQ7Z6M1 372 aa18.79■□□□□ 0.6
RAB40C-207ENST00000563109 PIGKQ92643 395 aa18.79■□□□□ 0.6
RAB40C-207ENST00000563109 SERPINB12Q96P63 405 aa18.79■□□□□ 0.6
RAB40C-207ENST00000563109 IL22Q9GZX6 179 aa18.79■□□□□ 0.6
RAB40C-207ENST00000563109 CDH19Q9H159 772 aa18.79■□□□□ 0.6
RAB40C-207ENST00000563109 GMEB2Q9UKD1 530 aa18.79■□□□□ 0.6
RAB40C-207ENST00000563109 ARL5AQ9Y689 179 aa18.79■□□□□ 0.6
RAB40C-207ENST00000563109 ZNF106Q9H2Y7 1883 aaKnown RBP18.78■□□□□ 0.6
RAB40C-207ENST00000563109 PRR5-ARHGAP8B1AHC4 643 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 PCCBP05166 539 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 GM2AP17900 193 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 ADRA1DP25100 572 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 MGAT1P26572 445 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 GUCY2DQ02846 1103 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 CAV1Q03135 178 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 IRF4Q15306 451 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 DNAJC21Q5F1R6 531 aaKnown RBP18.78■□□□□ 0.6
RAB40C-207ENST00000563109 NLRP9Q7RTR0 991 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 TECPR1Q7Z6L1 1165 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 SYT12Q8IV01 421 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 CBARPQ8N350 705 aaPredicted RBP18.78■□□□□ 0.6
RAB40C-207ENST00000563109 ZCCHC9Q8N567 271 aaKnown RBP18.78■□□□□ 0.6
RAB40C-207ENST00000563109 TP53I13Q8NBR0 393 aaPredicted RBP18.78■□□□□ 0.6
RAB40C-207ENST00000563109 AP2M1Q96CW1 435 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 SLC6A18Q96N87 628 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 RANBP9Q96S59 729 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 EBF2Q9HAK2 575 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 SAMD15Q9P1V8 674 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 CD84Q9UIB8 345 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 PCDHGA5Q9Y5G8 931 aa18.78■□□□□ 0.6
RAB40C-207ENST00000563109 DOCK9Q9BZ29 2069 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 A0A1B0GTW7 788 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 BCAT2O15382 392 aaPredicted RBP18.77■□□□□ 0.6
RAB40C-207ENST00000563109 PYGLP06737 847 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 SPAM1P38567 509 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 HADHAP40939 763 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 DCDC1P59894 354 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 RACK1P63244 317 aaKnown RBP18.77■□□□□ 0.6
RAB40C-207ENST00000563109 MSLNQ13421 630 aaPredicted RBP18.77■□□□□ 0.6
RAB40C-207ENST00000563109 TEAD4Q15561 434 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 WSCD2Q2TBF2 565 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 PCID2Q5JVF3 399 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 ARMC3Q5W041 872 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 ALS2CLQ60I27 953 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 RAET1GQ6H3X3 334 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 CASC4Q6P4E1 433 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 CAND1Q86VP6 1230 aaKnown RBP18.77■□□□□ 0.6
RAB40C-207ENST00000563109 PDIK1LQ8N165 341 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 OR4K2Q8NGD2 314 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 FAM174AQ8TBP5 190 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 PTCD2Q8WV60 388 aaKnown RBP18.77■□□□□ 0.6
RAB40C-207ENST00000563109 SKA1Q96BD8 255 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 PLEKHG4BQ96PX9 1271 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 ORAI3Q9BRQ5 295 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 ABCG8Q9H221 673 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 FAM83DQ9H4H8 585 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 TM9SF3Q9HD45 589 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 BPIFA1Q9NP55 256 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 FAM114A2Q9NRY5 505 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 SYBUQ9NX95 663 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 IL17CQ9P0M4 197 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 NFKBIL1Q9UBC1 381 aaPredicted RBP18.77■□□□□ 0.6
RAB40C-207ENST00000563109 PILRBQ9UKJ0 227 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 TCAF1Q9Y4C2 921 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 HS3ST3A1Q9Y663 406 aa18.77■□□□□ 0.6
RAB40C-207ENST00000563109 A6NNZ2 444 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 RAD51BO15315 384 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 LDB2O43679 373 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 BUD23O43709 281 aaKnown RBP18.76■□□□□ 0.59
RAB40C-207ENST00000563109 SLU7O95391 586 aaKnown RBP18.76■□□□□ 0.59
RAB40C-207ENST00000563109 TSHRP16473 764 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 BPIP17213 487 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 IGFALSP35858 605 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 AFF3P51826 1226 aaKnown RBP18.76■□□□□ 0.59
RAB40C-207ENST00000563109 ZNF140P52738 457 aaPredicted RBP18.76■□□□□ 0.59
RAB40C-207ENST00000563109 DRG2P55039 364 aaKnown RBP18.76■□□□□ 0.59
RAB40C-207ENST00000563109 ARL4CP56559 192 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 DPTQ07507 201 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 MTM1Q13496 603 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 HIF1AQ16665 826 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 CCDC38Q502W7 563 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 TEX35Q5T0J7 233 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 PEAR1Q5VY43 1037 aaPredicted RBP18.76■□□□□ 0.59
RAB40C-207ENST00000563109 ESRP1Q6NXG1 681 aaKnown RBP18.76■□□□□ 0.59
RAB40C-207ENST00000563109 KYAT3Q6YP21 454 aaKnown RBP18.76■□□□□ 0.59
RAB40C-207ENST00000563109 RFLNAQ6ZTI6 216 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 PTAR1Q7Z6K3 402 aaPredicted RBP18.76■□□□□ 0.59
RAB40C-207ENST00000563109 TMEM145Q8NBT3 493 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 STYXQ8WUJ0 223 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 CENPTQ96BT3 561 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 EID2BQ96D98 161 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 KLF6Q99612 283 aaPredicted RBP18.76■□□□□ 0.59
RAB40C-207ENST00000563109 C19orf43Q9BQ61 176 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 GRHL1Q9NZI5 618 aa18.76■□□□□ 0.59
RAB40C-207ENST00000563109 FNDC3AQ9Y2H6 1198 aaKnown RBP18.76■□□□□ 0.59
RAB40C-207ENST00000563109 ESYT3A0FGR9 886 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 SDR42E2A6NKP2 422 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 TOR1BO14657 336 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 AVILO75366 819 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 LMNAP02545 664 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms