RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 GALNT3Q14435 633 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 KCNJ11Q14654 390 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 PRKD1Q15139 912 aaPredicted RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 SNX30Q5VWJ9 437 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 GALNT6Q8NCL4 622 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 PEBP4Q96S96 227 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 NDNQ99608 321 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 RMND5AQ9H871 391 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 WDR41Q9HAD4 459 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 RXFP1Q9HBX9 757 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 CYP4F12Q9HCS2 524 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 PHPT1Q9NRX4 125 aaPredicted RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 ZDHHC7Q9NXF8 308 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 EVLQ9UI08 416 aaPredicted RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 CYTH4Q9UIA0 394 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 GLYATL1P3A0A0U1RQE8 302 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PRR23AA6NEV1 266 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 B2RBV5 119 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 GJB5O95377 273 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 ESR1P03372 595 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 IL4RP24394 825 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 CXCR2P25025 360 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 RPS24P62847 133 aaKnown RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 KDSRQ06136 332 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 C6orf10Q5SRN2 563 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 ANKRD22Q5VYY1 191 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PHACTR4Q8IZ21 702 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 SAR1AQ9NR31 198 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 ATP6V1HQ9UI12 483 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 CRYL1Q9Y2S2 319 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PDZK1P1A8MUH7 402 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PER2O15055 1255 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 TEX28O15482 410 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 MAP3K13O43283 966 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 NBNO60934 754 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 TBX18O95935 607 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 UGT2B4P06133 528 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 SYN1P17600 705 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 GRIA4P48058 902 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 SUZ12Q15022 739 aaKnown RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 CYP2A13Q16696 494 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 CARD16Q5EG05 197 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 TXNDC8Q6A555 127 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 BRAT1Q6PJG6 821 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 ANGPTL8Q6UXH0 198 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 OR4K2Q8NGD2 314 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PIWIL2Q8TC59 973 aaKnown RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 ZFAND2BQ8WV99 257 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 SEC14L1Q92503 715 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 TMEM120AQ9BXJ8 343 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 MRM3Q9HC36 420 aaKnown RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 SOBPA7XYQ1 873 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 TMEM63AO94886 807 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PAPSS2O95340 614 aaPredicted RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 TFEBP19484 476 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PTPN5P54829 565 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 SKP1P63208 163 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 INO80DQ53TQ3 878 aaPredicted RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 NEK5Q6P3R8 708 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 CPNE8Q86YQ8 564 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 TRAPPC5Q8IUR0 188 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 AUTS2Q8WXX7 1259 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 NAF1Q96HR8 494 aaKnown RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 NECTIN4Q96NY8 510 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PAAF1Q9BRP4 392 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 CAAP1Q9H8G2 361 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PLK2Q9NYY3 685 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 ZMAT5Q9UDW3 170 aaKnown RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 SNX10Q9Y5X0 201 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 C15orf38-AP3S2A0A0A6YYH1 394 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 KANSL1LA0AUZ9 987 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 SCAMP3O14828 347 aaKnown RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 ARHGEF9O43307 516 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 TCF4P15884 667 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 MZF1P28698 734 aaPredicted RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 PTGER3P43115 390 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 RPL14P50914 215 aaKnown RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 SLC18A1P54219 525 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 GDF10P55107 478 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 LIPMQ5VYY2 423 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 RAET1GQ6H3X3 334 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 RHBDF2Q6PJF5 856 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 ARPINQ7Z6K5 226 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 SCAIQ8N9R8 606 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 RIN3Q8TB24 985 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PIP4K2CQ8TBX8 421 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 TRMT2BQ96GJ1 504 aaKnown RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 UQCC2Q9BRT2 126 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 NEUROG2Q9H2A3 272 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 EVA1BQ9NVM1 165 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PCDHGA3Q9Y5H0 932 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 CACNB4O00305 520 aaPredicted RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 KIAA0355O15063 1070 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 UBDO15205 165 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 ZSCAN9O15535 394 aaPredicted RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 METTL18O95568 372 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 C2P06681 752 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 CSKP41240 450 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 GPR15P49685 360 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 KCNQ1P51787 676 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms